Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.13□□□□□ -0.47
Rd3Q8BRE0 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rd3Q8BRE0 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rd3Q8BRE0 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rd3Q8BRE0 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rd3Q8BRE0 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rd3Q8BRE0 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.13□□□□□ -0.47
Rd3Q8BRE0 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rd3Q8BRE0 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rd3Q8BRE0 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Gm38314-201ENSMUST00000195709 625 ntBASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Gm43671-201ENSMUST00000200422 433 ntBASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Gm18463-201ENSMUST00000207258 474 ntBASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rd3Q8BRE0 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Gm13047-201ENSMUST00000117116 815 ntBASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Gm15197-201ENSMUST00000120526 478 ntBASIC12.11□□□□□ -0.47
Rd3Q8BRE0 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Gm25554-201ENSMUST00000158075 113 ntBASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.11□□□□□ -0.47
Rd3Q8BRE0 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.11□□□□□ -0.47
Rd3Q8BRE0 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3Q8BRE0 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Rd3Q8BRE0 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rd3Q8BRE0 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rd3Q8BRE0 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Rd3Q8BRE0 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms