Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm1627-201ENSMUST00000188504 2588 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Gm37759-201ENSMUST00000194155 3246 ntBASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Duoxa1-203ENSMUST00000110538 2467 ntTSL 5 BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Gm43307-201ENSMUST00000199465 2371 ntBASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Gm17980-201ENSMUST00000217977 2349 ntBASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Gm11735-201ENSMUST00000106377 1581 ntBASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Gm42608-201ENSMUST00000197563 2018 ntBASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Colq-205ENSMUST00000150054 2867 ntTSL 5 BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Gm24830-201ENSMUST00000102024 166 ntBASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Gm17150-201ENSMUST00000165577 381 ntBASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Gm27023-201ENSMUST00000182372 285 ntBASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Gm26232-201ENSMUST00000083360 166 ntBASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Epc1-201ENSMUST00000028100 3965 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Gm37003-201ENSMUST00000194702 2827 ntBASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Gm26862-201ENSMUST00000181886 2191 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Rnf220Q6PDX6 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 AC117656.2-201ENSMUST00000224931 2215 ntBASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Gm25261-201ENSMUST00000157416 134 ntBASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Gm37748-201ENSMUST00000194379 1140 ntBASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms