Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chd4Q6PDQ2 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Chd4Q6PDQ2 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chd4Q6PDQ2 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Gm25677-201ENSMUST00000174983 72 ntBASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Gm27440-201ENSMUST00000184785 107 ntBASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 AC138716.2-201ENSMUST00000226670 1016 ntBASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 AC166574.4-201ENSMUST00000227165 1937 ntBASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Chd4Q6PDQ2 Gm43482-201ENSMUST00000202797 1861 ntBASIC14.66□□□□□ -0.06
Chd4Q6PDQ2 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd4Q6PDQ2 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd4Q6PDQ2 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC14.66□□□□□ -0.06
Chd4Q6PDQ2 Gm42779-201ENSMUST00000198807 406 ntBASIC14.66□□□□□ -0.06
Chd4Q6PDQ2 Gm44498-201ENSMUST00000199509 111 ntBASIC14.66□□□□□ -0.06
Chd4Q6PDQ2 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd4Q6PDQ2 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd4Q6PDQ2 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd4Q6PDQ2 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC14.66□□□□□ -0.06
Chd4Q6PDQ2 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chd4Q6PDQ2 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd4Q6PDQ2 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd4Q6PDQ2 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd4Q6PDQ2 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd4Q6PDQ2 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chd4Q6PDQ2 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd4Q6PDQ2 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Chd4Q6PDQ2 Gm12463-201ENSMUST00000118271 849 ntBASIC14.66□□□□□ -0.06
Chd4Q6PDQ2 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd4Q6PDQ2 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC14.66□□□□□ -0.06
Chd4Q6PDQ2 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC14.66□□□□□ -0.06
Chd4Q6PDQ2 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC14.66□□□□□ -0.06
Chd4Q6PDQ2 AC156790.2-201ENSMUST00000227115 568 ntBASIC14.66□□□□□ -0.06
Chd4Q6PDQ2 Nsmce2-203ENSMUST00000227173 1122 ntBASIC14.66□□□□□ -0.06
Chd4Q6PDQ2 BX649293.1-201ENSMUST00000227437 631 ntBASIC14.66□□□□□ -0.06
Chd4Q6PDQ2 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC14.66□□□□□ -0.06
Chd4Q6PDQ2 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd4Q6PDQ2 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd4Q6PDQ2 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd4Q6PDQ2 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC14.65□□□□□ -0.06
Chd4Q6PDQ2 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC14.65□□□□□ -0.06
Chd4Q6PDQ2 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC14.65□□□□□ -0.06
Chd4Q6PDQ2 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Chd4Q6PDQ2 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd4Q6PDQ2 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Chd4Q6PDQ2 Gm23769-201ENSMUST00000104441 121 ntBASIC14.65□□□□□ -0.06
Chd4Q6PDQ2 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Chd4Q6PDQ2 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC14.65□□□□□ -0.06
Chd4Q6PDQ2 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd4Q6PDQ2 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chd4Q6PDQ2 Mir8091-201ENSMUST00000183602 139 ntBASIC14.65□□□□□ -0.06
Chd4Q6PDQ2 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd4Q6PDQ2 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC14.65□□□□□ -0.06
Chd4Q6PDQ2 Gm8894-201ENSMUST00000074642 666 ntBASIC14.65□□□□□ -0.06
Chd4Q6PDQ2 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd4Q6PDQ2 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd4Q6PDQ2 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd4Q6PDQ2 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd4Q6PDQ2 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 165.3 ms