Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Gm26047-201ENSMUST00000157308 113 ntBASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Gm4310-201ENSMUST00000177847 889 ntBASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 AA914427-201ENSMUST00000193194 1166 ntBASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Gm43184-201ENSMUST00000197247 542 ntBASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Gm26047-202ENSMUST00000198840 115 ntBASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Gm13097-201ENSMUST00000210722 397 ntBASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Gm9797-202ENSMUST00000218003 294 ntBASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.47□□□□□ -0.73
Smarcd3Q6P9Z1 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.46□□□□□ -0.73
Smarcd3Q6P9Z1 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smarcd3Q6P9Z1 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smarcd3Q6P9Z1 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Smarcd3Q6P9Z1 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smarcd3Q6P9Z1 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Smarcd3Q6P9Z1 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.73
Smarcd3Q6P9Z1 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Smarcd3Q6P9Z1 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Smarcd3Q6P9Z1 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smarcd3Q6P9Z1 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smarcd3Q6P9Z1 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Smarcd3Q6P9Z1 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Smarcd3Q6P9Z1 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.46□□□□□ -0.73
Smarcd3Q6P9Z1 Gm14381-201ENSMUST00000122105 414 ntBASIC10.46□□□□□ -0.73
Smarcd3Q6P9Z1 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.46□□□□□ -0.73
Smarcd3Q6P9Z1 Gm3329-201ENSMUST00000159873 556 ntBASIC10.46□□□□□ -0.73
Smarcd3Q6P9Z1 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Smarcd3Q6P9Z1 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Smarcd3Q6P9Z1 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.46□□□□□ -0.73
Smarcd3Q6P9Z1 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.46□□□□□ -0.73
Smarcd3Q6P9Z1 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.46□□□□□ -0.73
Smarcd3Q6P9Z1 Gm45224-201ENSMUST00000208203 414 ntBASIC10.46□□□□□ -0.73
Smarcd3Q6P9Z1 Gm7940-201ENSMUST00000218195 769 ntBASIC10.46□□□□□ -0.73
Smarcd3Q6P9Z1 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smarcd3Q6P9Z1 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smarcd3Q6P9Z1 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms