Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.72
AtmQ62388 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
AtmQ62388 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
AtmQ62388 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC10.52□□□□□ -0.72
AtmQ62388 Gm38058-201ENSMUST00000194323 4368 ntBASIC10.52□□□□□ -0.72
AtmQ62388 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
AtmQ62388 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
AtmQ62388 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
AtmQ62388 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
AtmQ62388 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.52□□□□□ -0.73
AtmQ62388 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.52□□□□□ -0.73
AtmQ62388 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
AtmQ62388 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
AtmQ62388 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
AtmQ62388 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
AtmQ62388 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
AtmQ62388 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
AtmQ62388 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
AtmQ62388 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC10.52□□□□□ -0.73
AtmQ62388 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
AtmQ62388 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
AtmQ62388 Gm6238-201ENSMUST00000120999 465 ntBASIC10.52□□□□□ -0.73
AtmQ62388 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
AtmQ62388 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC10.52□□□□□ -0.73
AtmQ62388 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC10.52□□□□□ -0.73
AtmQ62388 Crip1-206ENSMUST00000200553 516 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
AtmQ62388 AC164429.1-201ENSMUST00000224210 518 ntBASIC10.52□□□□□ -0.73
AtmQ62388 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
AtmQ62388 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
AtmQ62388 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
AtmQ62388 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
AtmQ62388 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
AtmQ62388 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
AtmQ62388 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
AtmQ62388 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
AtmQ62388 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
AtmQ62388 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
AtmQ62388 Gm5944-201ENSMUST00000118182 1001 ntBASIC10.52□□□□□ -0.73
AtmQ62388 Gm5764-201ENSMUST00000118817 885 ntBASIC10.52□□□□□ -0.73
AtmQ62388 Olfml3-204ENSMUST00000169286 874 ntBASIC10.52□□□□□ -0.73
AtmQ62388 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC10.52□□□□□ -0.73
AtmQ62388 Gm7880-201ENSMUST00000203748 871 ntBASIC10.52□□□□□ -0.73
AtmQ62388 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC10.52□□□□□ -0.73
AtmQ62388 AC118639.1-202ENSMUST00000226957 653 ntBASIC10.52□□□□□ -0.73
AtmQ62388 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.51□□□□□ -0.73
AtmQ62388 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
AtmQ62388 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
AtmQ62388 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.51□□□□□ -0.73
AtmQ62388 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 Gm15221-201ENSMUST00000144439 414 ntTSL 3 BASIC10.51□□□□□ -0.73
AtmQ62388 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC10.51□□□□□ -0.73
AtmQ62388 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
AtmQ62388 Gm5205-201ENSMUST00000182253 1003 ntBASIC10.51□□□□□ -0.73
AtmQ62388 Mir6396-201ENSMUST00000183603 111 ntBASIC10.51□□□□□ -0.73
AtmQ62388 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC10.51□□□□□ -0.73
AtmQ62388 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 Gm43965-201ENSMUST00000203779 789 ntBASIC10.51□□□□□ -0.73
AtmQ62388 AC132881.1-201ENSMUST00000223780 1062 ntBASIC10.51□□□□□ -0.73
AtmQ62388 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.51□□□□□ -0.73
AtmQ62388 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
AtmQ62388 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 Gm12240-201ENSMUST00000120178 229 ntBASIC10.51□□□□□ -0.73
AtmQ62388 Apoc2-203ENSMUST00000142352 727 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 Gm16184-201ENSMUST00000162324 573 ntBASIC10.51□□□□□ -0.73
AtmQ62388 Scgb1b27-202ENSMUST00000173387 762 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
AtmQ62388 Gm20616-201ENSMUST00000177262 716 ntTSL 3 BASIC10.51□□□□□ -0.73
AtmQ62388 Gm22616-201ENSMUST00000179783 100 ntBASIC10.51□□□□□ -0.73
AtmQ62388 Gm44658-201ENSMUST00000207965 637 ntBASIC10.51□□□□□ -0.73
AtmQ62388 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.51□□□□□ -0.73
AtmQ62388 Birc3-202ENSMUST00000115672 2909 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
AtmQ62388 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.51□□□□□ -0.73
AtmQ62388 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
AtmQ62388 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.5□□□□□ -0.73
AtmQ62388 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms