Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Gm7851-201ENSMUST00000117574 323 ntBASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Gm13461-201ENSMUST00000120980 662 ntBASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Gm13263-201ENSMUST00000121271 838 ntBASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Mir5120-201ENSMUST00000175020 78 ntBASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Gm11783-201ENSMUST00000119549 885 ntBASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Gm8199-201ENSMUST00000121323 823 ntBASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Mir7070-201ENSMUST00000183657 86 ntBASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.15□□□□□ -0.46
Syne3Q4FZC9 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Gm5714-201ENSMUST00000197343 566 ntBASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Gm1821-202ENSMUST00000227415 750 ntBASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Syne3Q4FZC9 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Syne3Q4FZC9 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Syne3Q4FZC9 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Syne3Q4FZC9 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Syne3Q4FZC9 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Syne3Q4FZC9 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Syne3Q4FZC9 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms