Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 Gm20482-202ENSMUST00000174729 825 ntBASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 Gm37259-201ENSMUST00000193903 849 ntBASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 Gm42588-201ENSMUST00000200538 1297 ntBASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 Gm10297-201ENSMUST00000207136 651 ntBASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 Gm42479-201ENSMUST00000198654 1356 ntBASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Shisa3Q3UPR0 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Gm12372-201ENSMUST00000121654 768 ntBASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Gm27320-201ENSMUST00000184892 109 ntBASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Gm38319-201ENSMUST00000194537 1266 ntBASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Gm7619-201ENSMUST00000210649 1282 ntBASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Shisa3Q3UPR0 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Shisa3Q3UPR0 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Shisa3Q3UPR0 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC9.96□□□□□ -0.81
Shisa3Q3UPR0 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Shisa3Q3UPR0 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Shisa3Q3UPR0 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC9.96□□□□□ -0.81
Shisa3Q3UPR0 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Shisa3Q3UPR0 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Shisa3Q3UPR0 Gm37422-201ENSMUST00000193794 4718 ntBASIC9.96□□□□□ -0.81
Shisa3Q3UPR0 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Shisa3Q3UPR0 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Shisa3Q3UPR0 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms