Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Gm37333-201ENSMUST00000192904 2251 ntBASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Gm17376-201ENSMUST00000166016 84 ntBASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Gm25890-201ENSMUST00000177643 165 ntBASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Rnu1b2-201ENSMUST00000178073 165 ntBASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Rnu1b1-201ENSMUST00000178250 165 ntBASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Gm22614-201ENSMUST00000178300 165 ntBASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Gm38000-201ENSMUST00000192390 1215 ntBASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Ighv1-62-201ENSMUST00000193406 350 ntBASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Gm22042-201ENSMUST00000082989 165 ntBASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Gm26110-201ENSMUST00000083971 165 ntBASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Gm45828-201ENSMUST00000206938 1836 ntBASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Fndc4Q3TR08 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Gm45089-201ENSMUST00000208082 2040 ntBASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Gm14441-201ENSMUST00000121960 540 ntBASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Gm26083-201ENSMUST00000157904 193 ntBASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Gm38241-201ENSMUST00000192641 898 ntBASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Aprt-ps-201ENSMUST00000212311 505 ntBASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Gm6082-201ENSMUST00000215204 454 ntBASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Fndc4Q3TR08 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms