Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Tff1Q08423 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Tff1Q08423 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Tff1Q08423 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Tff1Q08423 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Tff1Q08423 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Tff1Q08423 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Tff1Q08423 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Tff1Q08423 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Tff1Q08423 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Tff1Q08423 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Tff1Q08423 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Tff1Q08423 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Tff1Q08423 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Tff1Q08423 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Tff1Q08423 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Tff1Q08423 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Tff1Q08423 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tff1Q08423 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tff1Q08423 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tff1Q08423 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tff1Q08423 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tff1Q08423 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Tff1Q08423 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tff1Q08423 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
Tff1Q08423 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tff1Q08423 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC9.51□□□□□ -0.89
Tff1Q08423 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Tff1Q08423 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tff1Q08423 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Tff1Q08423 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tff1Q08423 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Tff1Q08423 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Tff1Q08423 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Tff1Q08423 Gm4993-201ENSMUST00000118719 1174 ntBASIC9.51□□□□□ -0.89
Tff1Q08423 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Tff1Q08423 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Tff1Q08423 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
Tff1Q08423 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Tff1Q08423 AC107638.1-201ENSMUST00000213690 1061 ntBASIC9.51□□□□□ -0.89
Tff1Q08423 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tff1Q08423 Gm8420-201ENSMUST00000097103 598 ntBASIC9.51□□□□□ -0.89
Tff1Q08423 Gm43963-201ENSMUST00000203466 2488 ntBASIC9.51□□□□□ -0.89
Tff1Q08423 AC164426.2-201ENSMUST00000225993 2492 ntBASIC9.51□□□□□ -0.89
Tff1Q08423 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tff1Q08423 AC167022.1-201ENSMUST00000218647 1458 ntBASIC9.51□□□□□ -0.89
Tff1Q08423 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tff1Q08423 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC9.51□□□□□ -0.89
Tff1Q08423 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tff1Q08423 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Tff1Q08423 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Tff1Q08423 Gm21136-201ENSMUST00000186812 2575 ntBASIC9.51□□□□□ -0.89
Tff1Q08423 Gm6605-201ENSMUST00000031488 2574 ntBASIC9.51□□□□□ -0.89
Tff1Q08423 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tff1Q08423 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tff1Q08423 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tff1Q08423 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tff1Q08423 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tff1Q08423 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tff1Q08423 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tff1Q08423 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tff1Q08423 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tff1Q08423 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Tff1Q08423 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tff1Q08423 AC123619.2-202ENSMUST00000225097 1568 ntBASIC9.5□□□□□ -0.89
Tff1Q08423 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tff1Q08423 Gm43807-201ENSMUST00000200678 1781 ntBASIC9.5□□□□□ -0.89
Tff1Q08423 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tff1Q08423 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tff1Q08423 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tff1Q08423 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tff1Q08423 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tff1Q08423 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Tff1Q08423 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tff1Q08423 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
Tff1Q08423 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tff1Q08423 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tff1Q08423 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tff1Q08423 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC9.5□□□□□ -0.89
Tff1Q08423 Gm12015-201ENSMUST00000117065 843 ntBASIC9.5□□□□□ -0.89
Tff1Q08423 Gm12208-201ENSMUST00000122004 163 ntBASIC9.5□□□□□ -0.89
Tff1Q08423 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC9.5□□□□□ -0.89
Tff1Q08423 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC9.5□□□□□ -0.89
Tff1Q08423 Gm18734-201ENSMUST00000172937 808 ntBASIC9.5□□□□□ -0.89
Tff1Q08423 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC9.5□□□□□ -0.89
Tff1Q08423 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Tff1Q08423 Gm9034-201ENSMUST00000182071 1005 ntBASIC9.5□□□□□ -0.89
Tff1Q08423 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC9.5□□□□□ -0.89
Tff1Q08423 Ighv5-7-201ENSMUST00000192302 244 ntBASIC9.5□□□□□ -0.89
Tff1Q08423 Gm32999-201ENSMUST00000192693 562 ntBASIC9.5□□□□□ -0.89
Tff1Q08423 Gm43058-201ENSMUST00000197645 625 ntBASIC9.5□□□□□ -0.89
Tff1Q08423 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Tff1Q08423 Gm19287-201ENSMUST00000203190 358 ntBASIC9.5□□□□□ -0.89
Tff1Q08423 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tff1Q08423 Gm45219-201ENSMUST00000205602 465 ntBASIC9.5□□□□□ -0.89
Tff1Q08423 Gm7848-201ENSMUST00000210739 718 ntBASIC9.5□□□□□ -0.89
Tff1Q08423 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC9.5□□□□□ -0.89
Tff1Q08423 AC125486.1-201ENSMUST00000218701 320 ntBASIC9.5□□□□□ -0.89
Tff1Q08423 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tff1Q08423 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms