Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cntn3Q07409 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cntn3Q07409 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cntn3Q07409 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cntn3Q07409 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cntn3Q07409 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cntn3Q07409 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cntn3Q07409 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cntn3Q07409 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cntn3Q07409 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cntn3Q07409 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cntn3Q07409 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Cntn3Q07409 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cntn3Q07409 Gm14942-201ENSMUST00000119642 336 ntBASIC12.03□□□□□ -0.48
Cntn3Q07409 Gm11244-201ENSMUST00000121243 237 ntBASIC12.03□□□□□ -0.48
Cntn3Q07409 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cntn3Q07409 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.03□□□□□ -0.48
Cntn3Q07409 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cntn3Q07409 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Cntn3Q07409 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cntn3Q07409 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.03□□□□□ -0.48
Cntn3Q07409 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.03□□□□□ -0.48
Cntn3Q07409 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.03□□□□□ -0.48
Cntn3Q07409 Gm38314-201ENSMUST00000195709 625 ntBASIC12.03□□□□□ -0.48
Cntn3Q07409 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.03□□□□□ -0.48
Cntn3Q07409 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.03□□□□□ -0.48
Cntn3Q07409 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.03□□□□□ -0.48
Cntn3Q07409 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.03□□□□□ -0.48
Cntn3Q07409 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cntn3Q07409 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cntn3Q07409 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.03□□□□□ -0.48
Cntn3Q07409 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.03□□□□□ -0.48
Cntn3Q07409 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cntn3Q07409 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.03□□□□□ -0.48
Cntn3Q07409 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cntn3Q07409 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cntn3Q07409 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cntn3Q07409 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cntn3Q07409 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cntn3Q07409 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cntn3Q07409 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cntn3Q07409 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cntn3Q07409 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cntn3Q07409 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cntn3Q07409 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cntn3Q07409 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cntn3Q07409 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cntn3Q07409 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cntn3Q07409 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cntn3Q07409 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cntn3Q07409 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cntn3Q07409 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cntn3Q07409 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cntn3Q07409 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cntn3Q07409 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cntn3Q07409 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.02□□□□□ -0.48
Cntn3Q07409 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cntn3Q07409 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.02□□□□□ -0.49
Cntn3Q07409 Gm23272-201ENSMUST00000104053 129 ntBASIC12.02□□□□□ -0.49
Cntn3Q07409 Gm1848-201ENSMUST00000120711 789 ntBASIC12.02□□□□□ -0.49
Cntn3Q07409 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.02□□□□□ -0.49
Cntn3Q07409 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC12.02□□□□□ -0.49
Cntn3Q07409 Gm44315-201ENSMUST00000203041 219 ntBASIC12.02□□□□□ -0.49
Cntn3Q07409 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.02□□□□□ -0.49
Cntn3Q07409 Gm45219-201ENSMUST00000205602 465 ntBASIC12.02□□□□□ -0.49
Cntn3Q07409 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.02□□□□□ -0.49
Cntn3Q07409 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.02□□□□□ -0.49
Cntn3Q07409 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cntn3Q07409 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cntn3Q07409 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cntn3Q07409 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.49
Cntn3Q07409 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cntn3Q07409 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cntn3Q07409 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cntn3Q07409 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cntn3Q07409 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cntn3Q07409 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Cntn3Q07409 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cntn3Q07409 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cntn3Q07409 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cntn3Q07409 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cntn3Q07409 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cntn3Q07409 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.02□□□□□ -0.49
Cntn3Q07409 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cntn3Q07409 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.02□□□□□ -0.49
Cntn3Q07409 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cntn3Q07409 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cntn3Q07409 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn3Q07409 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn3Q07409 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn3Q07409 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn3Q07409 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cntn3Q07409 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.01□□□□□ -0.49
Cntn3Q07409 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.01□□□□□ -0.49
Cntn3Q07409 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cntn3Q07409 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn3Q07409 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn3Q07409 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn3Q07409 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.01□□□□□ -0.49
Cntn3Q07409 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms