Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.34□□□□□ -0.75
Lsm3P62311 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.34□□□□□ -0.75
Lsm3P62311 Scnn1a-201ENSMUST00000081440 3499 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 Gphn-201ENSMUST00000052472 3570 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm3P62311 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm3P62311 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.33□□□□□ -0.76
Lsm3P62311 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm3P62311 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm3P62311 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm3P62311 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.33□□□□□ -0.76
Lsm3P62311 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm3P62311 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm3P62311 CT025645.2-201ENSMUST00000223278 3827 ntBASIC10.33□□□□□ -0.76
Lsm3P62311 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Lsm3P62311 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm3P62311 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm3P62311 Gm6092-201ENSMUST00000121659 2029 ntBASIC10.33□□□□□ -0.76
Lsm3P62311 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm3P62311 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Lsm3P62311 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm3P62311 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm3P62311 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm3P62311 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Lsm3P62311 Gm27701-201ENSMUST00000184498 110 ntBASIC10.33□□□□□ -0.76
Lsm3P62311 Gm37201-201ENSMUST00000191845 523 ntBASIC10.33□□□□□ -0.76
Lsm3P62311 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.33□□□□□ -0.76
Lsm3P62311 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
Lsm3P62311 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.33□□□□□ -0.76
Lsm3P62311 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.33□□□□□ -0.76
Lsm3P62311 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.33□□□□□ -0.76
Lsm3P62311 AC162801.1-201ENSMUST00000220612 198 ntBASIC10.33□□□□□ -0.76
Lsm3P62311 Wdyhv1-203ENSMUST00000226889 394 ntBASIC10.33□□□□□ -0.76
Lsm3P62311 AC150560.1-201ENSMUST00000227731 1187 ntBASIC10.33□□□□□ -0.76
Lsm3P62311 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm3P62311 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm3P62311 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm3P62311 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Lsm3P62311 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Lsm3P62311 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Lsm3P62311 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm3P62311 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm3P62311 Gm8320-201ENSMUST00000177584 1762 ntBASIC10.33□□□□□ -0.76
Lsm3P62311 Gm8303-201ENSMUST00000178371 1762 ntBASIC10.33□□□□□ -0.76
Lsm3P62311 Gm8331-201ENSMUST00000178433 1762 ntBASIC10.33□□□□□ -0.76
Lsm3P62311 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm3P62311 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm3P62311 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm3P62311 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm3P62311 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm3P62311 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Lsm3P62311 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm3P62311 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm3P62311 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.33□□□□□ -0.76
Lsm3P62311 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.33□□□□□ -0.76
Lsm3P62311 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm3P62311 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm3P62311 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm3P62311 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm3P62311 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm3P62311 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC10.32□□□□□ -0.76
Lsm3P62311 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.32□□□□□ -0.76
Lsm3P62311 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm3P62311 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Lsm3P62311 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm3P62311 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm3P62311 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Lsm3P62311 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Lsm3P62311 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm3P62311 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.32□□□□□ -0.76
Lsm3P62311 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm3P62311 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.32□□□□□ -0.76
Lsm3P62311 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm3P62311 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm3P62311 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC10.32□□□□□ -0.76
Lsm3P62311 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC10.32□□□□□ -0.76
Lsm3P62311 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm3P62311 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm3P62311 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.32□□□□□ -0.76
Lsm3P62311 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.32□□□□□ -0.76
Lsm3P62311 Gm18584-201ENSMUST00000203098 964 ntBASIC10.32□□□□□ -0.76
Lsm3P62311 Gm20949-201ENSMUST00000206478 952 ntBASIC10.32□□□□□ -0.76
Lsm3P62311 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.32□□□□□ -0.76
Lsm3P62311 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.32□□□□□ -0.76
Lsm3P62311 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm3P62311 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm3P62311 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm3P62311 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm3P62311 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm3P62311 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Lsm3P62311 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm3P62311 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms