Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Gm25212-201ENSMUST00000179432 119 ntBASIC12.44□□□□□ -0.42
SqleP52019 n-R5s138-201ENSMUST00000179476 119 ntBASIC12.44□□□□□ -0.42
SqleP52019 n-R5s122-201ENSMUST00000179500 119 ntBASIC12.44□□□□□ -0.42
SqleP52019 n-R5s143-201ENSMUST00000179542 119 ntBASIC12.44□□□□□ -0.42
SqleP52019 n-R5s107-201ENSMUST00000179704 119 ntBASIC12.44□□□□□ -0.42
SqleP52019 Gm26391-201ENSMUST00000179843 119 ntBASIC12.44□□□□□ -0.42
SqleP52019 n-R5s110-201ENSMUST00000179995 119 ntBASIC12.44□□□□□ -0.42
SqleP52019 n-R5s128-201ENSMUST00000180096 119 ntBASIC12.44□□□□□ -0.42
SqleP52019 n-R5s124-201ENSMUST00000180334 119 ntBASIC12.44□□□□□ -0.42
SqleP52019 Gm26957-201ENSMUST00000182645 977 ntBASIC12.44□□□□□ -0.42
SqleP52019 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC12.44□□□□□ -0.42
SqleP52019 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SqleP52019 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
SqleP52019 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
SqleP52019 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC12.44□□□□□ -0.42
SqleP52019 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC12.44□□□□□ -0.42
SqleP52019 AC158986.2-201ENSMUST00000227487 618 ntBASIC12.44□□□□□ -0.42
SqleP52019 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
SqleP52019 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC12.44□□□□□ -0.42
SqleP52019 Gm24089-201ENSMUST00000093696 109 ntBASIC12.44□□□□□ -0.42
SqleP52019 Gm10581-201ENSMUST00000097986 231 ntBASIC12.44□□□□□ -0.42
SqleP52019 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.44□□□□□ -0.42
SqleP52019 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SqleP52019 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SqleP52019 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SqleP52019 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SqleP52019 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.44□□□□□ -0.42
SqleP52019 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SqleP52019 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SqleP52019 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SqleP52019 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SqleP52019 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SqleP52019 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SqleP52019 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SqleP52019 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SqleP52019 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SqleP52019 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SqleP52019 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SqleP52019 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SqleP52019 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SqleP52019 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SqleP52019 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SqleP52019 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC12.43□□□□□ -0.42
SqleP52019 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SqleP52019 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
SqleP52019 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.43□□□□□ -0.42
SqleP52019 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
SqleP52019 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 Gm20493-201ENSMUST00000173706 213 ntBASIC12.43□□□□□ -0.42
SqleP52019 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 Gm5976-201ENSMUST00000180794 996 ntBASIC12.43□□□□□ -0.42
SqleP52019 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC12.43□□□□□ -0.42
SqleP52019 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC12.43□□□□□ -0.42
SqleP52019 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SqleP52019 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC12.43□□□□□ -0.42
SqleP52019 Gm43726-201ENSMUST00000199110 775 ntBASIC12.43□□□□□ -0.42
SqleP52019 AC134913.2-201ENSMUST00000225017 771 ntBASIC12.43□□□□□ -0.42
SqleP52019 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
SqleP52019 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.43□□□□□ -0.42
SqleP52019 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
SqleP52019 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SqleP52019 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SqleP52019 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SqleP52019 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.42□□□□□ -0.42
SqleP52019 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SqleP52019 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SqleP52019 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SqleP52019 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.42□□□□□ -0.42
SqleP52019 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SqleP52019 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SqleP52019 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms