Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Prox1P48437 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Prox1P48437 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Prox1P48437 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Prox1P48437 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Prox1P48437 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Prox1P48437 Gm45161-201ENSMUST00000207316 2263 ntBASIC10.99□□□□□ -0.65
Prox1P48437 Gm25214-201ENSMUST00000104573 129 ntBASIC10.99□□□□□ -0.65
Prox1P48437 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.99□□□□□ -0.65
Prox1P48437 Gm13350-201ENSMUST00000120519 479 ntBASIC10.99□□□□□ -0.65
Prox1P48437 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Prox1P48437 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Prox1P48437 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Prox1P48437 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.99□□□□□ -0.65
Prox1P48437 Mir8109-201ENSMUST00000184375 117 ntBASIC10.99□□□□□ -0.65
Prox1P48437 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.99□□□□□ -0.65
Prox1P48437 Gm18893-201ENSMUST00000198416 943 ntBASIC10.99□□□□□ -0.65
Prox1P48437 Gm7046-201ENSMUST00000221351 977 ntBASIC10.99□□□□□ -0.65
Prox1P48437 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Prox1P48437 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Prox1P48437 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Prox1P48437 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Prox1P48437 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Prox1P48437 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Prox1P48437 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Prox1P48437 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Prox1P48437 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Prox1P48437 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Prox1P48437 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Prox1P48437 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Prox1P48437 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.99□□□□□ -0.65
Prox1P48437 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Prox1P48437 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Prox1P48437 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Prox1P48437 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Prox1P48437 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.99□□□□□ -0.65
Prox1P48437 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC10.99□□□□□ -0.65
Prox1P48437 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Prox1P48437 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prox1P48437 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Prox1P48437 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prox1P48437 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Prox1P48437 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Prox1P48437 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prox1P48437 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
Prox1P48437 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Prox1P48437 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prox1P48437 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prox1P48437 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Prox1P48437 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Prox1P48437 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.98□□□□□ -0.65
Prox1P48437 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prox1P48437 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prox1P48437 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Prox1P48437 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prox1P48437 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prox1P48437 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Prox1P48437 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Prox1P48437 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prox1P48437 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Prox1P48437 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.98□□□□□ -0.65
Prox1P48437 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Prox1P48437 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.98□□□□□ -0.65
Prox1P48437 Gm29396-201ENSMUST00000185659 716 ntBASIC10.98□□□□□ -0.65
Prox1P48437 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prox1P48437 Olfr284-202ENSMUST00000206647 966 ntBASIC10.98□□□□□ -0.65
Prox1P48437 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.98□□□□□ -0.65
Prox1P48437 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prox1P48437 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.98□□□□□ -0.65
Prox1P48437 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Prox1P48437 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Prox1P48437 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Prox1P48437 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Prox1P48437 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prox1P48437 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prox1P48437 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prox1P48437 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prox1P48437 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.98□□□□□ -0.65
Prox1P48437 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prox1P48437 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prox1P48437 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prox1P48437 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prox1P48437 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Prox1P48437 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prox1P48437 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prox1P48437 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prox1P48437 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Prox1P48437 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prox1P48437 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prox1P48437 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Prox1P48437 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Prox1P48437 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.97□□□□□ -0.65
Prox1P48437 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prox1P48437 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Prox1P48437 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Prox1P48437 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prox1P48437 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.97□□□□□ -0.65
Prox1P48437 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Prox1P48437 Gm43999-201ENSMUST00000204286 2889 ntBASIC10.97□□□□□ -0.65
Prox1P48437 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms