Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TfamP40630 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.08□□□□□ -0.64
TfamP40630 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC11.07□□□□□ -0.64
TfamP40630 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
TfamP40630 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
TfamP40630 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
TfamP40630 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
TfamP40630 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.07□□□□□ -0.64
TfamP40630 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
TfamP40630 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
TfamP40630 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.07□□□□□ -0.64
TfamP40630 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
TfamP40630 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
TfamP40630 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
TfamP40630 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.07□□□□□ -0.64
TfamP40630 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.07□□□□□ -0.64
TfamP40630 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
TfamP40630 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.07□□□□□ -0.64
TfamP40630 Gm7003-201ENSMUST00000195089 312 ntBASIC11.07□□□□□ -0.64
TfamP40630 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.07□□□□□ -0.64
TfamP40630 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.07□□□□□ -0.64
TfamP40630 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.07□□□□□ -0.64
TfamP40630 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.07□□□□□ -0.64
TfamP40630 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC11.07□□□□□ -0.64
TfamP40630 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
TfamP40630 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TfamP40630 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.06□□□□□ -0.64
TfamP40630 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
TfamP40630 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TfamP40630 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
TfamP40630 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
TfamP40630 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.06□□□□□ -0.64
TfamP40630 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TfamP40630 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TfamP40630 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TfamP40630 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TfamP40630 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TfamP40630 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
TfamP40630 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
TfamP40630 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TfamP40630 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
TfamP40630 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.06□□□□□ -0.64
TfamP40630 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TfamP40630 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.06□□□□□ -0.64
TfamP40630 Gm45113-201ENSMUST00000207518 165 ntBASIC11.06□□□□□ -0.64
TfamP40630 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.06□□□□□ -0.64
TfamP40630 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TfamP40630 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TfamP40630 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.06□□□□□ -0.64
TfamP40630 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
TfamP40630 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TfamP40630 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TfamP40630 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
TfamP40630 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TfamP40630 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TfamP40630 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TfamP40630 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TfamP40630 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.06□□□□□ -0.64
TfamP40630 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TfamP40630 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TfamP40630 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
TfamP40630 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
TfamP40630 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
TfamP40630 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TfamP40630 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
TfamP40630 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms