Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfc1P35601 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfc1P35601 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfc1P35601 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfc1P35601 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rfc1P35601 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfc1P35601 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rfc1P35601 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rfc1P35601 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.05□□□□□ -0.48
Rfc1P35601 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfc1P35601 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rfc1P35601 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC12.05□□□□□ -0.48
Rfc1P35601 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfc1P35601 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfc1P35601 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfc1P35601 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Rfc1P35601 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.04□□□□□ -0.48
Rfc1P35601 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfc1P35601 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
Rfc1P35601 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfc1P35601 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfc1P35601 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfc1P35601 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rfc1P35601 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfc1P35601 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfc1P35601 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.04□□□□□ -0.48
Rfc1P35601 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC12.04□□□□□ -0.48
Rfc1P35601 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfc1P35601 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rfc1P35601 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfc1P35601 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfc1P35601 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Rfc1P35601 Gm11793-201ENSMUST00000120433 981 ntBASIC12.04□□□□□ -0.48
Rfc1P35601 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rfc1P35601 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Rfc1P35601 Gm8062-201ENSMUST00000139696 444 ntBASIC12.04□□□□□ -0.48
Rfc1P35601 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rfc1P35601 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.04□□□□□ -0.48
Rfc1P35601 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Rfc1P35601 Mospd4-201ENSMUST00000180618 576 ntBASIC12.04□□□□□ -0.48
Rfc1P35601 Gm2546-201ENSMUST00000182630 991 ntBASIC12.04□□□□□ -0.48
Rfc1P35601 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.04□□□□□ -0.48
Rfc1P35601 Mir7085-201ENSMUST00000184353 66 ntBASIC12.04□□□□□ -0.48
Rfc1P35601 Gm43118-201ENSMUST00000199149 775 ntBASIC12.04□□□□□ -0.48
Rfc1P35601 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rfc1P35601 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.04□□□□□ -0.48
Rfc1P35601 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfc1P35601 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rfc1P35601 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfc1P35601 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC12.04□□□□□ -0.48
Rfc1P35601 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rfc1P35601 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfc1P35601 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfc1P35601 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfc1P35601 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rfc1P35601 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rfc1P35601 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfc1P35601 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfc1P35601 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfc1P35601 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rfc1P35601 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rfc1P35601 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfc1P35601 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.04□□□□□ -0.48
Rfc1P35601 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rfc1P35601 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Rfc1P35601 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rfc1P35601 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rfc1P35601 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfc1P35601 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfc1P35601 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfc1P35601 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.03□□□□□ -0.48
Rfc1P35601 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rfc1P35601 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.03□□□□□ -0.48
Rfc1P35601 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfc1P35601 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfc1P35601 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rfc1P35601 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.03□□□□□ -0.48
Rfc1P35601 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.03□□□□□ -0.48
Rfc1P35601 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC12.03□□□□□ -0.48
Rfc1P35601 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rfc1P35601 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rfc1P35601 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rfc1P35601 Gm12957-201ENSMUST00000117835 377 ntBASIC12.03□□□□□ -0.48
Rfc1P35601 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.03□□□□□ -0.48
Rfc1P35601 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rfc1P35601 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rfc1P35601 Gm28882-201ENSMUST00000185504 314 ntBASIC12.03□□□□□ -0.48
Rfc1P35601 Gm18054-201ENSMUST00000207539 555 ntBASIC12.03□□□□□ -0.48
Rfc1P35601 Gm17931-201ENSMUST00000208132 634 ntBASIC12.03□□□□□ -0.48
Rfc1P35601 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.03□□□□□ -0.48
Rfc1P35601 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.03□□□□□ -0.48
Rfc1P35601 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfc1P35601 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfc1P35601 Gm9823-201ENSMUST00000051212 327 ntBASIC12.03□□□□□ -0.48
Rfc1P35601 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rfc1P35601 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.03□□□□□ -0.48
Rfc1P35601 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfc1P35601 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfc1P35601 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfc1P35601 Gm38271-201ENSMUST00000192296 1603 ntBASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms