Protein–RNA interactions for Protein: P33215

Nedd1, Protein NEDD1, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd1P33215 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd1P33215 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.83□□□□□ -0.36
Nedd1P33215 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Nedd1P33215 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nedd1P33215 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd1P33215 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.83□□□□□ -0.36
Nedd1P33215 Gm34023-201ENSMUST00000195539 217 ntBASIC12.83□□□□□ -0.36
Nedd1P33215 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Nedd1P33215 Gm42518-201ENSMUST00000196277 938 ntBASIC12.83□□□□□ -0.36
Nedd1P33215 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.83□□□□□ -0.36
Nedd1P33215 Gm43377-201ENSMUST00000201640 455 ntBASIC12.83□□□□□ -0.36
Nedd1P33215 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.83□□□□□ -0.36
Nedd1P33215 Gm6991-201ENSMUST00000218475 1178 ntBASIC12.83□□□□□ -0.36
Nedd1P33215 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.83□□□□□ -0.36
Nedd1P33215 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.83□□□□□ -0.36
Nedd1P33215 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd1P33215 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd1P33215 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd1P33215 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd1P33215 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd1P33215 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nedd1P33215 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd1P33215 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd1P33215 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd1P33215 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd1P33215 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd1P33215 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.83□□□□□ -0.36
Nedd1P33215 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd1P33215 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd1P33215 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.82□□□□□ -0.36
Nedd1P33215 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd1P33215 Gm33366-201ENSMUST00000195583 3827 ntBASIC12.82□□□□□ -0.36
Nedd1P33215 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Nedd1P33215 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd1P33215 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd1P33215 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd1P33215 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd1P33215 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Nedd1P33215 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nedd1P33215 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Nedd1P33215 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nedd1P33215 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.82□□□□□ -0.36
Nedd1P33215 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd1P33215 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Nedd1P33215 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.82□□□□□ -0.36
Nedd1P33215 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC12.82□□□□□ -0.36
Nedd1P33215 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.82□□□□□ -0.36
Nedd1P33215 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd1P33215 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Nedd1P33215 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.82□□□□□ -0.36
Nedd1P33215 Gm44323-201ENSMUST00000198689 129 ntBASIC12.82□□□□□ -0.36
Nedd1P33215 Gm18561-201ENSMUST00000206027 804 ntBASIC12.82□□□□□ -0.36
Nedd1P33215 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.82□□□□□ -0.36
Nedd1P33215 Gm45594-201ENSMUST00000211717 241 ntBASIC12.82□□□□□ -0.36
Nedd1P33215 Mt1-202ENSMUST00000211807 1085 ntBASIC12.82□□□□□ -0.36
Nedd1P33215 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd1P33215 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.82□□□□□ -0.36
Nedd1P33215 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.82□□□□□ -0.36
Nedd1P33215 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC12.82□□□□□ -0.36
Nedd1P33215 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.82□□□□□ -0.36
Nedd1P33215 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd1P33215 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.82□□□□□ -0.36
Nedd1P33215 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd1P33215 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Nedd1P33215 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.82□□□□□ -0.36
Nedd1P33215 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd1P33215 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd1P33215 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd1P33215 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd1P33215 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd1P33215 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd1P33215 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Nedd1P33215 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd1P33215 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nedd1P33215 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd1P33215 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd1P33215 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd1P33215 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd1P33215 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd1P33215 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Nedd1P33215 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12.81□□□□□ -0.36
Nedd1P33215 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.81□□□□□ -0.36
Nedd1P33215 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd1P33215 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd1P33215 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.81□□□□□ -0.36
Nedd1P33215 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.81□□□□□ -0.36
Nedd1P33215 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Nedd1P33215 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd1P33215 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd1P33215 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.81□□□□□ -0.36
Nedd1P33215 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.81□□□□□ -0.36
Nedd1P33215 Gm14363-201ENSMUST00000122304 409 ntBASIC12.81□□□□□ -0.36
Nedd1P33215 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd1P33215 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.81□□□□□ -0.36
Nedd1P33215 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.81□□□□□ -0.36
Nedd1P33215 Gm5599-201ENSMUST00000209602 788 ntBASIC12.81□□□□□ -0.36
Nedd1P33215 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.81□□□□□ -0.36
Nedd1P33215 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.81□□□□□ -0.36
Nedd1P33215 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd1P33215 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms