Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nckap1P28660 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.43□□□□□ -0.58
Nckap1P28660 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Nckap1P28660 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nckap1P28660 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nckap1P28660 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nckap1P28660 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nckap1P28660 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Nckap1P28660 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nckap1P28660 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nckap1P28660 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nckap1P28660 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nckap1P28660 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Nckap1P28660 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Nckap1P28660 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nckap1P28660 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Nckap1P28660 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nckap1P28660 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nckap1P28660 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nckap1P28660 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.43□□□□□ -0.58
Nckap1P28660 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nckap1P28660 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Nckap1P28660 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nckap1P28660 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nckap1P28660 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.42□□□□□ -0.58
Nckap1P28660 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Nckap1P28660 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Nckap1P28660 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Nckap1P28660 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nckap1P28660 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nckap1P28660 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nckap1P28660 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nckap1P28660 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC11.42□□□□□ -0.58
Nckap1P28660 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Nckap1P28660 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nckap1P28660 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.42□□□□□ -0.58
Nckap1P28660 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.42□□□□□ -0.58
Nckap1P28660 Gm14219-201ENSMUST00000120414 288 ntBASIC11.42□□□□□ -0.58
Nckap1P28660 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nckap1P28660 Gm12628-201ENSMUST00000122193 382 ntBASIC11.42□□□□□ -0.58
Nckap1P28660 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.42□□□□□ -0.58
Nckap1P28660 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.42□□□□□ -0.58
Nckap1P28660 Gm3671-201ENSMUST00000182463 1007 ntBASIC11.42□□□□□ -0.58
Nckap1P28660 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.42□□□□□ -0.58
Nckap1P28660 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.42□□□□□ -0.58
Nckap1P28660 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.42□□□□□ -0.58
Nckap1P28660 Gm5100-201ENSMUST00000195631 589 ntBASIC11.42□□□□□ -0.58
Nckap1P28660 Gm19166-201ENSMUST00000196041 1063 ntBASIC11.42□□□□□ -0.58
Nckap1P28660 Gm45120-201ENSMUST00000208880 408 ntBASIC11.42□□□□□ -0.58
Nckap1P28660 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Nckap1P28660 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nckap1P28660 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Nckap1P28660 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nckap1P28660 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Nckap1P28660 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.42□□□□□ -0.58
Nckap1P28660 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nckap1P28660 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.42□□□□□ -0.58
Nckap1P28660 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nckap1P28660 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nckap1P28660 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.42□□□□□ -0.58
Nckap1P28660 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.42□□□□□ -0.58
Nckap1P28660 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nckap1P28660 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nckap1P28660 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nckap1P28660 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Nckap1P28660 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nckap1P28660 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Nckap1P28660 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Nckap1P28660 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nckap1P28660 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nckap1P28660 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.41□□□□□ -0.58
Nckap1P28660 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.41□□□□□ -0.58
Nckap1P28660 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.41□□□□□ -0.58
Nckap1P28660 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nckap1P28660 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nckap1P28660 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nckap1P28660 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nckap1P28660 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Nckap1P28660 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Nckap1P28660 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nckap1P28660 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nckap1P28660 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.41□□□□□ -0.58
Nckap1P28660 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nckap1P28660 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nckap1P28660 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nckap1P28660 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Nckap1P28660 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nckap1P28660 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Nckap1P28660 Gm4294-201ENSMUST00000105169 614 ntBASIC11.41□□□□□ -0.58
Nckap1P28660 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.41□□□□□ -0.58
Nckap1P28660 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nckap1P28660 Gm14807-201ENSMUST00000116640 983 ntBASIC11.41□□□□□ -0.58
Nckap1P28660 Gm11675-201ENSMUST00000121873 832 ntBASIC11.41□□□□□ -0.58
Nckap1P28660 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.41□□□□□ -0.58
Nckap1P28660 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.41□□□□□ -0.58
Nckap1P28660 Gm6407-201ENSMUST00000176468 549 ntBASIC11.41□□□□□ -0.58
Nckap1P28660 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.41□□□□□ -0.58
Nckap1P28660 Gm29410-201ENSMUST00000188383 694 ntBASIC11.41□□□□□ -0.58
Nckap1P28660 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Nckap1P28660 Gm42816-201ENSMUST00000198433 325 ntBASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms