Protein–RNA interactions for Protein: P28230

Gjb1, Gap junction beta-1 protein, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gjb1P28230 AC115304.2-201ENSMUST00000226399 332 ntBASIC12.76□□□□□ -0.37
Gjb1P28230 Gm26782-203ENSMUST00000227103 751 ntBASIC12.76□□□□□ -0.37
Gjb1P28230 AC121567.1-201ENSMUST00000227213 842 ntBASIC12.76□□□□□ -0.37
Gjb1P28230 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gjb1P28230 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Gjb1P28230 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gjb1P28230 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gjb1P28230 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Gjb1P28230 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gjb1P28230 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.76□□□□□ -0.37
Gjb1P28230 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gjb1P28230 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gjb1P28230 Gm6024-201ENSMUST00000117850 1558 ntBASIC12.76□□□□□ -0.37
Gjb1P28230 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Gjb1P28230 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Gjb1P28230 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gjb1P28230 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gjb1P28230 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gjb1P28230 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gjb1P28230 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gjb1P28230 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gjb1P28230 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Gjb1P28230 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 Gm12129-201ENSMUST00000120104 1147 ntBASIC12.75□□□□□ -0.37
Gjb1P28230 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.75□□□□□ -0.37
Gjb1P28230 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.75□□□□□ -0.37
Gjb1P28230 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC12.75□□□□□ -0.37
Gjb1P28230 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC12.75□□□□□ -0.37
Gjb1P28230 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Gjb1P28230 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.75□□□□□ -0.37
Gjb1P28230 Ighv1-70-201ENSMUST00000196509 351 ntBASIC12.75□□□□□ -0.37
Gjb1P28230 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 Gm44323-201ENSMUST00000198689 129 ntBASIC12.75□□□□□ -0.37
Gjb1P28230 Gm30055-201ENSMUST00000203175 803 ntBASIC12.75□□□□□ -0.37
Gjb1P28230 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC12.75□□□□□ -0.37
Gjb1P28230 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Gjb1P28230 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Gjb1P28230 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gjb1P28230 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gjb1P28230 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gjb1P28230 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gjb1P28230 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gjb1P28230 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gjb1P28230 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gjb1P28230 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.74□□□□□ -0.37
Gjb1P28230 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gjb1P28230 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gjb1P28230 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gjb1P28230 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gjb1P28230 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gjb1P28230 Prss23os-202ENSMUST00000179361 1362 ntBASIC12.74□□□□□ -0.37
Gjb1P28230 Gm42970-201ENSMUST00000196407 1352 ntBASIC12.74□□□□□ -0.37
Gjb1P28230 Gm13192-201ENSMUST00000101199 208 ntBASIC12.74□□□□□ -0.37
Gjb1P28230 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Gjb1P28230 Gm23132-201ENSMUST00000104254 132 ntBASIC12.74□□□□□ -0.37
Gjb1P28230 Gm23439-201ENSMUST00000104292 132 ntBASIC12.74□□□□□ -0.37
Gjb1P28230 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gjb1P28230 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC12.74□□□□□ -0.37
Gjb1P28230 Gm15528-201ENSMUST00000117821 864 ntBASIC12.74□□□□□ -0.37
Gjb1P28230 Gm10443-201ENSMUST00000119024 210 ntBASIC12.74□□□□□ -0.37
Gjb1P28230 Gm8302-201ENSMUST00000119217 852 ntBASIC12.74□□□□□ -0.37
Gjb1P28230 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gjb1P28230 Gm26313-201ENSMUST00000157770 308 ntBASIC12.74□□□□□ -0.37
Gjb1P28230 Gm6114-201ENSMUST00000182472 968 ntBASIC12.74□□□□□ -0.37
Gjb1P28230 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC12.74□□□□□ -0.37
Gjb1P28230 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC12.74□□□□□ -0.37
Gjb1P28230 Gm38007-201ENSMUST00000192187 313 ntBASIC12.74□□□□□ -0.37
Gjb1P28230 Gm20568-201ENSMUST00000197129 208 ntBASIC12.74□□□□□ -0.37
Gjb1P28230 Gm17936-201ENSMUST00000199413 988 ntBASIC12.74□□□□□ -0.37
Gjb1P28230 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.74□□□□□ -0.37
Gjb1P28230 Gm9102-201ENSMUST00000219250 465 ntBASIC12.74□□□□□ -0.37
Gjb1P28230 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms