Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col8a2P25318 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC9.53□□□□□ -0.88
Col8a2P25318 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Col8a2P25318 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col8a2P25318 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Col8a2P25318 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC9.53□□□□□ -0.88
Col8a2P25318 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col8a2P25318 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col8a2P25318 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Col8a2P25318 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col8a2P25318 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col8a2P25318 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Col8a2P25318 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC9.53□□□□□ -0.88
Col8a2P25318 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col8a2P25318 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC9.53□□□□□ -0.88
Col8a2P25318 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC9.53□□□□□ -0.88
Col8a2P25318 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Col8a2P25318 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Col8a2P25318 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col8a2P25318 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Col8a2P25318 Gm23694-201ENSMUST00000179335 110 ntBASIC9.53□□□□□ -0.88
Col8a2P25318 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC9.53□□□□□ -0.88
Col8a2P25318 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC9.53□□□□□ -0.88
Col8a2P25318 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col8a2P25318 Gm18561-201ENSMUST00000206027 804 ntBASIC9.53□□□□□ -0.88
Col8a2P25318 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Col8a2P25318 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC9.53□□□□□ -0.88
Col8a2P25318 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Col8a2P25318 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Col8a2P25318 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col8a2P25318 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Col8a2P25318 Gm5879-201ENSMUST00000089501 1209 ntBASIC9.53□□□□□ -0.88
Col8a2P25318 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col8a2P25318 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col8a2P25318 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col8a2P25318 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Col8a2P25318 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
Col8a2P25318 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col8a2P25318 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Col8a2P25318 Gm9244-201ENSMUST00000056767 2129 ntBASIC9.53□□□□□ -0.88
Col8a2P25318 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col8a2P25318 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col8a2P25318 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col8a2P25318 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col8a2P25318 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC9.53□□□□□ -0.88
Col8a2P25318 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col8a2P25318 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col8a2P25318 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC9.53□□□□□ -0.88
Col8a2P25318 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Col8a2P25318 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC9.53□□□□□ -0.88
Col8a2P25318 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col8a2P25318 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Col8a2P25318 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC9.52□□□□□ -0.88
Col8a2P25318 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
Col8a2P25318 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.88
Col8a2P25318 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Col8a2P25318 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Col8a2P25318 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Col8a2P25318 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Col8a2P25318 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Col8a2P25318 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Col8a2P25318 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Col8a2P25318 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Col8a2P25318 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Gm13182-201ENSMUST00000122241 312 ntBASIC9.52□□□□□ -0.89
Col8a2P25318 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC9.52□□□□□ -0.89
Col8a2P25318 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Col8a2P25318 Gm15744-201ENSMUST00000161734 213 ntBASIC9.52□□□□□ -0.89
Col8a2P25318 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC9.52□□□□□ -0.89
Col8a2P25318 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC9.52□□□□□ -0.89
Col8a2P25318 Gm29358-202ENSMUST00000187941 3227 ntBASIC9.52□□□□□ -0.89
Col8a2P25318 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC9.52□□□□□ -0.89
Col8a2P25318 Gm44421-201ENSMUST00000205064 1221 ntBASIC9.52□□□□□ -0.89
Col8a2P25318 Gm45550-201ENSMUST00000209380 946 ntBASIC9.52□□□□□ -0.89
Col8a2P25318 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC9.52□□□□□ -0.89
Col8a2P25318 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC9.52□□□□□ -0.89
Col8a2P25318 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC9.52□□□□□ -0.89
Col8a2P25318 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Col8a2P25318 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Col8a2P25318 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC9.52□□□□□ -0.89
Col8a2P25318 Gm5451-201ENSMUST00000080545 579 ntBASIC9.52□□□□□ -0.89
Col8a2P25318 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Gm37969-201ENSMUST00000195777 3409 ntBASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms