Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cdx1P18111 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC9.29□□□□□ -0.92
Cdx1P18111 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Cdx1P18111 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC9.29□□□□□ -0.92
Cdx1P18111 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC9.29□□□□□ -0.92
Cdx1P18111 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC9.29□□□□□ -0.92
Cdx1P18111 Ighv8-10-201ENSMUST00000199579 358 ntBASIC9.29□□□□□ -0.92
Cdx1P18111 Gm8099-201ENSMUST00000200510 742 ntBASIC9.29□□□□□ -0.92
Cdx1P18111 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Cdx1P18111 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC9.29□□□□□ -0.92
Cdx1P18111 Gm5904-201ENSMUST00000210286 865 ntBASIC9.29□□□□□ -0.92
Cdx1P18111 Gm7619-201ENSMUST00000210649 1282 ntBASIC9.29□□□□□ -0.92
Cdx1P18111 Gm13097-201ENSMUST00000210722 397 ntBASIC9.29□□□□□ -0.92
Cdx1P18111 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC9.29□□□□□ -0.92
Cdx1P18111 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC9.29□□□□□ -0.92
Cdx1P18111 Gm32025-201ENSMUST00000217960 307 ntBASIC9.29□□□□□ -0.92
Cdx1P18111 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cdx1P18111 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Cdx1P18111 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC9.29□□□□□ -0.92
Cdx1P18111 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Cdx1P18111 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC9.29□□□□□ -0.92
Cdx1P18111 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC9.29□□□□□ -0.92
Cdx1P18111 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Cdx1P18111 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Cdx1P18111 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
Cdx1P18111 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cdx1P18111 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC9.29□□□□□ -0.92
Cdx1P18111 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cdx1P18111 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Cdx1P18111 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC9.29□□□□□ -0.92
Cdx1P18111 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Cdx1P18111 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cdx1P18111 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cdx1P18111 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cdx1P18111 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cdx1P18111 AC138329.2-201ENSMUST00000225579 1842 ntBASIC9.28□□□□□ -0.92
Cdx1P18111 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cdx1P18111 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cdx1P18111 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cdx1P18111 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cdx1P18111 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC9.28□□□□□ -0.92
Cdx1P18111 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Cdx1P18111 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC9.28□□□□□ -0.92
Cdx1P18111 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Cdx1P18111 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cdx1P18111 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cdx1P18111 Gm10699-201ENSMUST00000098916 2130 ntBASIC9.28□□□□□ -0.92
Cdx1P18111 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cdx1P18111 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cdx1P18111 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Cdx1P18111 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Cdx1P18111 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cdx1P18111 Gm14017-201ENSMUST00000121934 386 ntBASIC9.28□□□□□ -0.92
Cdx1P18111 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC9.28□□□□□ -0.92
Cdx1P18111 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Cdx1P18111 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Cdx1P18111 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Cdx1P18111 Gm22121-201ENSMUST00000175148 54 ntBASIC9.28□□□□□ -0.92
Cdx1P18111 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Cdx1P18111 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC9.28□□□□□ -0.92
Cdx1P18111 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC9.28□□□□□ -0.92
Cdx1P18111 CT030182.1-201ENSMUST00000225935 533 ntBASIC9.28□□□□□ -0.92
Cdx1P18111 Gm10371-202ENSMUST00000228010 1081 ntBASIC9.28□□□□□ -0.92
Cdx1P18111 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cdx1P18111 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cdx1P18111 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Cdx1P18111 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cdx1P18111 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Cdx1P18111 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Cdx1P18111 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC9.28□□□□□ -0.92
Cdx1P18111 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Cdx1P18111 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Cdx1P18111 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC9.28□□□□□ -0.92
Cdx1P18111 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cdx1P18111 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Cdx1P18111 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cdx1P18111 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Cdx1P18111 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cdx1P18111 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cdx1P18111 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cdx1P18111 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cdx1P18111 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cdx1P18111 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cdx1P18111 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC9.27□□□□□ -0.92
Cdx1P18111 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Cdx1P18111 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Cdx1P18111 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
Cdx1P18111 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Cdx1P18111 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
Cdx1P18111 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Gm9361-201ENSMUST00000198695 1507 ntBASIC9.27□□□□□ -0.93
Cdx1P18111 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Cdx1P18111 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms