Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.04□□□□□ -0.8
P04224 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
P04224 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
P04224 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
P04224 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Olfr569-202ENSMUST00000217024 4741 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
P04224 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
P04224 Tns1-201ENSMUST00000169786 9966 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
P04224 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
P04224 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC10.03□□□□□ -0.8
P04224 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Gm13127-201ENSMUST00000118978 1389 ntBASIC10.03□□□□□ -0.8
P04224 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
P04224 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Gm43372-201ENSMUST00000202662 3016 ntBASIC10.03□□□□□ -0.8
P04224 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
P04224 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.03□□□□□ -0.8
P04224 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.03□□□□□ -0.8
P04224 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.03□□□□□ -0.8
P04224 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Gm25261-201ENSMUST00000157416 134 ntBASIC10.03□□□□□ -0.8
P04224 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.03□□□□□ -0.8
P04224 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
P04224 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
P04224 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
P04224 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.03□□□□□ -0.8
P04224 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Gm43002-201ENSMUST00000200310 155 ntBASIC10.03□□□□□ -0.8
P04224 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 AC121870.2-201ENSMUST00000214343 1870 ntBASIC10.03□□□□□ -0.8
P04224 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.03□□□□□ -0.8
P04224 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.03□□□□□ -0.8
P04224 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
P04224 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Fgf6-201ENSMUST00000000187 4657 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.03□□□□□ -0.8
P04224 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.03□□□□□ -0.8
P04224 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Gm20796-201ENSMUST00000180355 5838 ntBASIC10.03□□□□□ -0.8
P04224 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.03□□□□□ -0.8
P04224 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
P04224 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.03□□□□□ -0.8
P04224 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC10.03□□□□□ -0.8
P04224 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
P04224 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.8
P04224 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
P04224 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
P04224 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.02□□□□□ -0.8
P04224 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
P04224 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
P04224 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
P04224 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
P04224 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms