Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
P01852 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
P01852 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01852 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
P01852 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01852 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
P01852 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01852 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
P01852 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
P01852 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.49□□□□□ -0.73
P01852 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.49□□□□□ -0.73
P01852 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
P01852 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
P01852 Gm15352-201ENSMUST00000118696 270 ntBASIC10.49□□□□□ -0.73
P01852 Mup-ps26-201ENSMUST00000121751 202 ntBASIC10.49□□□□□ -0.73
P01852 Gm24844-201ENSMUST00000158679 127 ntBASIC10.49□□□□□ -0.73
P01852 Gm8459-201ENSMUST00000162504 760 ntBASIC10.49□□□□□ -0.73
P01852 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC10.49□□□□□ -0.73
P01852 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.49□□□□□ -0.73
P01852 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01852 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
P01852 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
P01852 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01852 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
P01852 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
P01852 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01852 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01852 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01852 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
P01852 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01852 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.49□□□□□ -0.73
P01852 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.49□□□□□ -0.73
P01852 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
P01852 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01852 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.49□□□□□ -0.73
P01852 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.49□□□□□ -0.73
P01852 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01852 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01852 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
P01852 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01852 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01852 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
P01852 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
P01852 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01852 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01852 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01852 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01852 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01852 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01852 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01852 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.48□□□□□ -0.73
P01852 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01852 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.48□□□□□ -0.73
P01852 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
P01852 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.48□□□□□ -0.73
P01852 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
P01852 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P01852 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01852 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P01852 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
P01852 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC10.48□□□□□ -0.73
P01852 Gm22711-201ENSMUST00000116890 133 ntBASIC10.48□□□□□ -0.73
P01852 Gm11500-201ENSMUST00000118237 601 ntBASIC10.48□□□□□ -0.73
P01852 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.48□□□□□ -0.73
P01852 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.48□□□□□ -0.73
P01852 n-R5s14-201ENSMUST00000122688 107 ntBASIC10.48□□□□□ -0.73
P01852 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01852 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P01852 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC10.48□□□□□ -0.73
P01852 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
P01852 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.48□□□□□ -0.73
P01852 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01852 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC10.48□□□□□ -0.73
P01852 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
P01852 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P01852 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P01852 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC10.48□□□□□ -0.73
P01852 Gm43947-201ENSMUST00000203019 959 ntBASIC10.48□□□□□ -0.73
P01852 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
P01852 Gm17831-201ENSMUST00000205579 900 ntBASIC10.48□□□□□ -0.73
P01852 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.48□□□□□ -0.73
P01852 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01852 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01852 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01852 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01852 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
P01852 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P01852 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
P01852 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01852 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01852 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.48□□□□□ -0.73
P01852 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01852 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.48□□□□□ -0.73
P01852 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01852 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
P01852 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01852 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01852 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P01852 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.48□□□□□ -0.73
P01852 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms