Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
NgfP01139 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
NgfP01139 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
NgfP01139 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
NgfP01139 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
NgfP01139 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
NgfP01139 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
NgfP01139 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
NgfP01139 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
NgfP01139 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
NgfP01139 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
NgfP01139 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.08□□□□□ -0.8
NgfP01139 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
NgfP01139 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
NgfP01139 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
NgfP01139 Snord23-201ENSMUST00000116828 109 ntBASIC10.08□□□□□ -0.8
NgfP01139 Gm11502-201ENSMUST00000120917 1211 ntBASIC10.08□□□□□ -0.8
NgfP01139 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC10.08□□□□□ -0.8
NgfP01139 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
NgfP01139 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
NgfP01139 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
NgfP01139 Gm7719-201ENSMUST00000182374 975 ntBASIC10.08□□□□□ -0.8
NgfP01139 Gm19013-201ENSMUST00000183895 1222 ntBASIC10.08□□□□□ -0.8
NgfP01139 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
NgfP01139 Gm19014-201ENSMUST00000184828 1189 ntBASIC10.08□□□□□ -0.8
NgfP01139 Gm42660-201ENSMUST00000197733 947 ntBASIC10.08□□□□□ -0.8
NgfP01139 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC10.08□□□□□ -0.8
NgfP01139 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
NgfP01139 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.08□□□□□ -0.8
NgfP01139 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC10.08□□□□□ -0.8
NgfP01139 Capsl-202ENSMUST00000226688 739 ntBASIC10.08□□□□□ -0.8
NgfP01139 AC154589.2-201ENSMUST00000228847 251 ntBASIC10.08□□□□□ -0.8
NgfP01139 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
NgfP01139 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
NgfP01139 Gm25580-201ENSMUST00000083409 327 ntBASIC10.08□□□□□ -0.8
NgfP01139 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
NgfP01139 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC10.08□□□□□ -0.8
NgfP01139 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC10.08□□□□□ -0.8
NgfP01139 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
NgfP01139 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
NgfP01139 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
NgfP01139 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
NgfP01139 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
NgfP01139 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
NgfP01139 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
NgfP01139 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
NgfP01139 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC10.07□□□□□ -0.8
NgfP01139 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
NgfP01139 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
NgfP01139 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.07□□□□□ -0.8
NgfP01139 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
NgfP01139 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
NgfP01139 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
NgfP01139 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.07□□□□□ -0.8
NgfP01139 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
NgfP01139 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
NgfP01139 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
NgfP01139 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
NgfP01139 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
NgfP01139 Gm5641-201ENSMUST00000091130 1488 ntBASIC10.07□□□□□ -0.8
NgfP01139 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
NgfP01139 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
NgfP01139 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC10.07□□□□□ -0.8
NgfP01139 Gm13047-201ENSMUST00000117116 815 ntBASIC10.07□□□□□ -0.8
NgfP01139 Gm14213-201ENSMUST00000119778 768 ntBASIC10.07□□□□□ -0.8
NgfP01139 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC10.07□□□□□ -0.8
NgfP01139 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC10.07□□□□□ -0.8
NgfP01139 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
NgfP01139 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
NgfP01139 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
NgfP01139 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
NgfP01139 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
NgfP01139 Mrip-ps-201ENSMUST00000184613 940 ntBASIC10.07□□□□□ -0.8
NgfP01139 Gm42430-201ENSMUST00000197209 616 ntBASIC10.07□□□□□ -0.8
NgfP01139 Gm43002-201ENSMUST00000200310 155 ntBASIC10.07□□□□□ -0.8
NgfP01139 Gm18706-201ENSMUST00000210053 1066 ntBASIC10.07□□□□□ -0.8
NgfP01139 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
NgfP01139 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
NgfP01139 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
NgfP01139 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
NgfP01139 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
NgfP01139 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
NgfP01139 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC10.07□□□□□ -0.8
NgfP01139 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
NgfP01139 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
NgfP01139 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
NgfP01139 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.07□□□□□ -0.8
NgfP01139 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
NgfP01139 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
NgfP01139 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
NgfP01139 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
NgfP01139 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
NgfP01139 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
NgfP01139 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
NgfP01139 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
NgfP01139 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
NgfP01139 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
NgfP01139 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
NgfP01139 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
NgfP01139 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms