Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
CopeO89079 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC11.76□□□□□ -0.53
CopeO89079 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
CopeO89079 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.76□□□□□ -0.53
CopeO89079 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.76□□□□□ -0.53
CopeO89079 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.76□□□□□ -0.53
CopeO89079 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.76□□□□□ -0.53
CopeO89079 Gm43433-201ENSMUST00000196573 481 ntBASIC11.76□□□□□ -0.53
CopeO89079 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 Gm17827-201ENSMUST00000211825 742 ntBASIC11.76□□□□□ -0.53
CopeO89079 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.76□□□□□ -0.53
CopeO89079 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.76□□□□□ -0.53
CopeO89079 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.76□□□□□ -0.53
CopeO89079 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
CopeO89079 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
CopeO89079 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.76□□□□□ -0.53
CopeO89079 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.76□□□□□ -0.53
CopeO89079 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CopeO89079 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.76□□□□□ -0.53
CopeO89079 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CopeO89079 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CopeO89079 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CopeO89079 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CopeO89079 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
CopeO89079 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CopeO89079 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.75□□□□□ -0.53
CopeO89079 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CopeO89079 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CopeO89079 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CopeO89079 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
CopeO89079 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CopeO89079 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CopeO89079 Gm13296-201ENSMUST00000117854 997 ntBASIC11.75□□□□□ -0.53
CopeO89079 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.75□□□□□ -0.53
CopeO89079 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CopeO89079 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.75□□□□□ -0.53
CopeO89079 Gm27501-201ENSMUST00000183599 107 ntBASIC11.75□□□□□ -0.53
CopeO89079 Gm43184-201ENSMUST00000197247 542 ntBASIC11.75□□□□□ -0.53
CopeO89079 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CopeO89079 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.75□□□□□ -0.53
CopeO89079 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.75□□□□□ -0.53
CopeO89079 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CopeO89079 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
CopeO89079 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
CopeO89079 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
CopeO89079 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CopeO89079 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CopeO89079 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CopeO89079 Gm37954-201ENSMUST00000195400 2071 ntBASIC11.75□□□□□ -0.53
CopeO89079 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CopeO89079 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CopeO89079 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.75□□□□□ -0.53
CopeO89079 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CopeO89079 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CopeO89079 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CopeO89079 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CopeO89079 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CopeO89079 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CopeO89079 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.75□□□□□ -0.53
CopeO89079 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CopeO89079 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CopeO89079 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CopeO89079 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
CopeO89079 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CopeO89079 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CopeO89079 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CopeO89079 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms