Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdmt1O55055 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdmt1O55055 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trdmt1O55055 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trdmt1O55055 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdmt1O55055 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdmt1O55055 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trdmt1O55055 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdmt1O55055 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trdmt1O55055 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdmt1O55055 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trdmt1O55055 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trdmt1O55055 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC12.59□□□□□ -0.39
Trdmt1O55055 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trdmt1O55055 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trdmt1O55055 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trdmt1O55055 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trdmt1O55055 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trdmt1O55055 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trdmt1O55055 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trdmt1O55055 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trdmt1O55055 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trdmt1O55055 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trdmt1O55055 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trdmt1O55055 Gm19013-201ENSMUST00000183895 1222 ntBASIC12.59□□□□□ -0.39
Trdmt1O55055 Gm19014-201ENSMUST00000184828 1189 ntBASIC12.59□□□□□ -0.39
Trdmt1O55055 Gm6855-201ENSMUST00000206307 790 ntBASIC12.59□□□□□ -0.39
Trdmt1O55055 Lect2-202ENSMUST00000225183 823 ntBASIC12.59□□□□□ -0.39
Trdmt1O55055 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdmt1O55055 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdmt1O55055 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC12.59□□□□□ -0.39
Trdmt1O55055 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdmt1O55055 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trdmt1O55055 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trdmt1O55055 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdmt1O55055 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trdmt1O55055 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trdmt1O55055 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Trdmt1O55055 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trdmt1O55055 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trdmt1O55055 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdmt1O55055 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdmt1O55055 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdmt1O55055 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trdmt1O55055 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdmt1O55055 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdmt1O55055 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trdmt1O55055 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdmt1O55055 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trdmt1O55055 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trdmt1O55055 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trdmt1O55055 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trdmt1O55055 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trdmt1O55055 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trdmt1O55055 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trdmt1O55055 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trdmt1O55055 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trdmt1O55055 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC12.58□□□□□ -0.4
Trdmt1O55055 Gm9244-201ENSMUST00000056767 2129 ntBASIC12.58□□□□□ -0.4
Trdmt1O55055 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdmt1O55055 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
Trdmt1O55055 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdmt1O55055 Gm15196-201ENSMUST00000121406 482 ntBASIC12.58□□□□□ -0.4
Trdmt1O55055 Gm3828-201ENSMUST00000121817 257 ntBASIC12.58□□□□□ -0.4
Trdmt1O55055 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trdmt1O55055 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdmt1O55055 Gm25677-201ENSMUST00000174983 72 ntBASIC12.58□□□□□ -0.4
Trdmt1O55055 Gm9507-202ENSMUST00000180157 654 ntBASIC12.58□□□□□ -0.4
Trdmt1O55055 Gm37852-201ENSMUST00000193027 350 ntBASIC12.58□□□□□ -0.4
Trdmt1O55055 Gm43966-201ENSMUST00000203301 612 ntBASIC12.58□□□□□ -0.4
Trdmt1O55055 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trdmt1O55055 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trdmt1O55055 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC12.58□□□□□ -0.4
Trdmt1O55055 AC153962.2-201ENSMUST00000219417 550 ntBASIC12.58□□□□□ -0.4
Trdmt1O55055 AC154589.2-201ENSMUST00000228847 251 ntBASIC12.58□□□□□ -0.4
Trdmt1O55055 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdmt1O55055 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdmt1O55055 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdmt1O55055 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdmt1O55055 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdmt1O55055 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trdmt1O55055 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdmt1O55055 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdmt1O55055 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.58□□□□□ -0.4
Trdmt1O55055 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdmt1O55055 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdmt1O55055 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdmt1O55055 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trdmt1O55055 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trdmt1O55055 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trdmt1O55055 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trdmt1O55055 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdmt1O55055 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Trdmt1O55055 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdmt1O55055 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdmt1O55055 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trdmt1O55055 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdmt1O55055 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.57□□□□□ -0.4
Trdmt1O55055 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdmt1O55055 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms