Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc180J3QNE4 AC154537.1-201ENSMUST00000226101 1304 ntBASIC20.61■□□□□ 0.89
Ccdc180J3QNE4 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc180J3QNE4 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc180J3QNE4 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ccdc180J3QNE4 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc180J3QNE4 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc180J3QNE4 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc180J3QNE4 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc180J3QNE4 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc180J3QNE4 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc180J3QNE4 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc180J3QNE4 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc180J3QNE4 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc180J3QNE4 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc180J3QNE4 Gm20493-201ENSMUST00000173706 213 ntBASIC20.61■□□□□ 0.89
Ccdc180J3QNE4 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc180J3QNE4 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Ccdc180J3QNE4 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc180J3QNE4 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc180J3QNE4 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc180J3QNE4 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc180J3QNE4 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc180J3QNE4 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ccdc180J3QNE4 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC20.6■□□□□ 0.89
Ccdc180J3QNE4 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc180J3QNE4 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc180J3QNE4 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc180J3QNE4 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc180J3QNE4 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc180J3QNE4 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc180J3QNE4 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc180J3QNE4 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc180J3QNE4 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc180J3QNE4 Gm23675-201ENSMUST00000157311 125 ntBASIC20.6■□□□□ 0.89
Ccdc180J3QNE4 Gm26119-201ENSMUST00000175601 104 ntBASIC20.6■□□□□ 0.89
Ccdc180J3QNE4 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc180J3QNE4 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC20.6■□□□□ 0.89
Ccdc180J3QNE4 Gm8162-201ENSMUST00000213951 665 ntBASIC20.6■□□□□ 0.89
Ccdc180J3QNE4 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC20.6■□□□□ 0.89
Ccdc180J3QNE4 AC164556.1-201ENSMUST00000221318 751 ntBASIC20.6■□□□□ 0.89
Ccdc180J3QNE4 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc180J3QNE4 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ccdc180J3QNE4 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC20.59■□□□□ 0.89
Ccdc180J3QNE4 Gm5739-201ENSMUST00000208601 1703 ntBASIC20.59■□□□□ 0.89
Ccdc180J3QNE4 Gm12461-201ENSMUST00000120231 1239 ntBASIC20.59■□□□□ 0.89
Ccdc180J3QNE4 Gm26368-201ENSMUST00000157826 118 ntBASIC20.59■□□□□ 0.89
Ccdc180J3QNE4 Gm5210-201ENSMUST00000182150 1010 ntBASIC20.59■□□□□ 0.89
Ccdc180J3QNE4 Gm7255-201ENSMUST00000187371 908 ntBASIC20.59■□□□□ 0.89
Ccdc180J3QNE4 Gm43752-201ENSMUST00000198475 697 ntBASIC20.59■□□□□ 0.89
Ccdc180J3QNE4 Gm44953-201ENSMUST00000208745 1286 ntBASIC20.59■□□□□ 0.89
Ccdc180J3QNE4 CT010480.2-201ENSMUST00000225424 737 ntBASIC20.59■□□□□ 0.89
Ccdc180J3QNE4 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ccdc180J3QNE4 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc180J3QNE4 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc180J3QNE4 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc180J3QNE4 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc180J3QNE4 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc180J3QNE4 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc180J3QNE4 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc180J3QNE4 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc180J3QNE4 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ccdc180J3QNE4 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ccdc180J3QNE4 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc180J3QNE4 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc180J3QNE4 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc180J3QNE4 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc180J3QNE4 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc180J3QNE4 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC20.58■□□□□ 0.89
Ccdc180J3QNE4 Gm12745-201ENSMUST00000121767 214 ntBASIC20.58■□□□□ 0.89
Ccdc180J3QNE4 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc180J3QNE4 Gm25872-201ENSMUST00000177784 100 ntBASIC20.58■□□□□ 0.89
Ccdc180J3QNE4 Gm11942-201ENSMUST00000180255 345 ntBASIC20.58■□□□□ 0.89
Ccdc180J3QNE4 Gm7939-201ENSMUST00000201233 1050 ntBASIC20.58■□□□□ 0.89
Ccdc180J3QNE4 BC080696-201ENSMUST00000202858 1218 ntBASIC20.58■□□□□ 0.89
Ccdc180J3QNE4 Gm7880-201ENSMUST00000203748 871 ntBASIC20.58■□□□□ 0.89
Ccdc180J3QNE4 Gm7192-201ENSMUST00000210793 1137 ntBASIC20.58■□□□□ 0.89
Ccdc180J3QNE4 AC152169.1-201ENSMUST00000223901 701 ntBASIC20.58■□□□□ 0.89
Ccdc180J3QNE4 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc180J3QNE4 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc180J3QNE4 Gm38042-201ENSMUST00000191614 5208 ntBASIC20.58■□□□□ 0.89
Ccdc180J3QNE4 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc180J3QNE4 Gm38192-201ENSMUST00000194364 1847 ntBASIC20.58■□□□□ 0.89
Ccdc180J3QNE4 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc180J3QNE4 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Ccdc180J3QNE4 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc180J3QNE4 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC20.58■□□□□ 0.88
Ccdc180J3QNE4 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC20.58■□□□□ 0.88
Ccdc180J3QNE4 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc180J3QNE4 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc180J3QNE4 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC20.58■□□□□ 0.88
Ccdc180J3QNE4 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
Ccdc180J3QNE4 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC20.58■□□□□ 0.88
Ccdc180J3QNE4 Prss23os-202ENSMUST00000179361 1362 ntBASIC20.58■□□□□ 0.88
Ccdc180J3QNE4 Gm8384-201ENSMUST00000190905 704 ntBASIC20.58■□□□□ 0.88
Ccdc180J3QNE4 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc180J3QNE4 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc180J3QNE4 Gm40414-201ENSMUST00000197608 481 ntBASIC20.58■□□□□ 0.88
Ccdc180J3QNE4 Gm42751-201ENSMUST00000198065 559 ntBASIC20.58■□□□□ 0.88
Ccdc180J3QNE4 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms