Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atf6F6VAN0 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atf6F6VAN0 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.77□□□□□ -0.53
Atf6F6VAN0 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atf6F6VAN0 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Gm7857-201ENSMUST00000117957 358 ntBASIC11.76□□□□□ -0.53
Atf6F6VAN0 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Gm11450-201ENSMUST00000121144 333 ntBASIC11.76□□□□□ -0.53
Atf6F6VAN0 Gm7150-201ENSMUST00000122032 981 ntBASIC11.76□□□□□ -0.53
Atf6F6VAN0 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Atf6F6VAN0 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.76□□□□□ -0.53
Atf6F6VAN0 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Gm10807-201ENSMUST00000177134 795 ntBASIC11.76□□□□□ -0.53
Atf6F6VAN0 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Mir6927-201ENSMUST00000184494 71 ntBASIC11.76□□□□□ -0.53
Atf6F6VAN0 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.76□□□□□ -0.53
Atf6F6VAN0 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Gm44008-201ENSMUST00000204345 412 ntBASIC11.76□□□□□ -0.53
Atf6F6VAN0 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.76□□□□□ -0.53
Atf6F6VAN0 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC11.76□□□□□ -0.53
Atf6F6VAN0 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.76□□□□□ -0.53
Atf6F6VAN0 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.76□□□□□ -0.53
Atf6F6VAN0 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.76□□□□□ -0.53
Atf6F6VAN0 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atf6F6VAN0 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf6F6VAN0 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf6F6VAN0 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Atf6F6VAN0 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf6F6VAN0 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Atf6F6VAN0 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf6F6VAN0 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf6F6VAN0 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.75□□□□□ -0.53
Atf6F6VAN0 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Atf6F6VAN0 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf6F6VAN0 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf6F6VAN0 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf6F6VAN0 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf6F6VAN0 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Atf6F6VAN0 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Atf6F6VAN0 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.75□□□□□ -0.53
Atf6F6VAN0 Gm8731-201ENSMUST00000118088 412 ntBASIC11.75□□□□□ -0.53
Atf6F6VAN0 Gm12217-201ENSMUST00000118858 696 ntBASIC11.75□□□□□ -0.53
Atf6F6VAN0 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.75□□□□□ -0.53
Atf6F6VAN0 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Atf6F6VAN0 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.75□□□□□ -0.53
Atf6F6VAN0 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.75□□□□□ -0.53
Atf6F6VAN0 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.75□□□□□ -0.53
Atf6F6VAN0 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.75□□□□□ -0.53
Atf6F6VAN0 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Atf6F6VAN0 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.75□□□□□ -0.53
Atf6F6VAN0 Gm6108-201ENSMUST00000208365 367 ntBASIC11.75□□□□□ -0.53
Atf6F6VAN0 AC102523.2-201ENSMUST00000227813 983 ntBASIC11.75□□□□□ -0.53
Atf6F6VAN0 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf6F6VAN0 Ntng1-201ENSMUST00000051253 327 ntBASIC11.75□□□□□ -0.53
Atf6F6VAN0 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf6F6VAN0 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Atf6F6VAN0 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Atf6F6VAN0 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Atf6F6VAN0 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Atf6F6VAN0 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Atf6F6VAN0 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Atf6F6VAN0 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Atf6F6VAN0 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf6F6VAN0 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.75□□□□□ -0.53
Atf6F6VAN0 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf6F6VAN0 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf6F6VAN0 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.75□□□□□ -0.53
Atf6F6VAN0 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Atf6F6VAN0 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf6F6VAN0 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf6F6VAN0 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf6F6VAN0 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms