Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm12129-201ENSMUST00000120104 1147 ntBASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Gm15620-201ENSMUST00000122949 270 ntBASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Gm42430-201ENSMUST00000197209 616 ntBASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Gm10020-201ENSMUST00000081993 612 ntBASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Gm5641-201ENSMUST00000091130 1488 ntBASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Gm18733-202ENSMUST00000174447 401 ntBASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 AC129975.1-201ENSMUST00000224816 592 ntBASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Scn3aA2ASI5 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Gm22937-201ENSMUST00000103954 131 ntBASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Gm12969-201ENSMUST00000120199 1004 ntBASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn3aA2ASI5 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Gm13039-201ENSMUST00000118638 794 ntBASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Gm16547-201ENSMUST00000159474 293 ntBASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Gm5621-201ENSMUST00000187303 640 ntBASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Gm6677-201ENSMUST00000195100 441 ntBASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Gm44552-201ENSMUST00000205458 1247 ntBASIC12.62□□□□□ -0.39
Scn3aA2ASI5 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms