Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Gm27331-201ENSMUST00000183705 60 ntBASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Gm28581-201ENSMUST00000186086 2177 ntBASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Gm37827-201ENSMUST00000194486 1542 ntBASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 AC135669.1-201ENSMUST00000213585 412 ntBASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Ctnnd1-202ENSMUST00000066177 5044 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Gm10699-201ENSMUST00000098916 2130 ntBASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Smarcc2-202ENSMUST00000099131 4562 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Wwtr1-202ENSMUST00000120977 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Aff1-201ENSMUST00000031256 8312 ntAPPRIS P4 TSL 5 BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Atp1a3-202ENSMUST00000102858 3895 ntTSL 2 BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 AC123738.2-201ENSMUST00000223791 1899 ntBASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Gm8036-201ENSMUST00000118089 1718 ntBASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Scn4a-201ENSMUST00000021056 6598 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Brca2-201ENSMUST00000044620 10724 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Gm11803-201ENSMUST00000119966 444 ntBASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Gm12091-201ENSMUST00000146791 830 ntBASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Gm18018-201ENSMUST00000198273 408 ntBASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Sptan1-205ENSMUST00000113719 8018 ntTSL 5 BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Trav8-1A0A075B641 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms