Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm43822-201ENSMUST00000200285 476 ntBASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Gm17812-201ENSMUST00000204935 318 ntBASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Gm10254-201ENSMUST00000052888 867 ntBASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb3S4R1G7 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Gm25700-201ENSMUST00000177693 110 ntBASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Mir7677-201ENSMUST00000184226 67 ntBASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Gm27320-201ENSMUST00000184892 109 ntBASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 AY036118-201ENSMUST00000200021 923 ntBASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb3S4R1G7 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms