Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RpgrQ9R0X5 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RpgrQ9R0X5 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
RpgrQ9R0X5 Gm12164-201ENSMUST00000121695 551 ntBASIC11.69□□□□□ -0.54
RpgrQ9R0X5 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
RpgrQ9R0X5 Gm26047-201ENSMUST00000157308 113 ntBASIC11.69□□□□□ -0.54
RpgrQ9R0X5 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RpgrQ9R0X5 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
RpgrQ9R0X5 Gm18893-201ENSMUST00000198416 943 ntBASIC11.69□□□□□ -0.54
RpgrQ9R0X5 Gm26047-202ENSMUST00000198840 115 ntBASIC11.69□□□□□ -0.54
RpgrQ9R0X5 Gm44262-201ENSMUST00000204969 372 ntBASIC11.69□□□□□ -0.54
RpgrQ9R0X5 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.69□□□□□ -0.54
RpgrQ9R0X5 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.69□□□□□ -0.54
RpgrQ9R0X5 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RpgrQ9R0X5 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RpgrQ9R0X5 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RpgrQ9R0X5 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RpgrQ9R0X5 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RpgrQ9R0X5 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
RpgrQ9R0X5 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RpgrQ9R0X5 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.69□□□□□ -0.54
RpgrQ9R0X5 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RpgrQ9R0X5 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RpgrQ9R0X5 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
RpgrQ9R0X5 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
RpgrQ9R0X5 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RpgrQ9R0X5 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RpgrQ9R0X5 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RpgrQ9R0X5 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Gm6114-201ENSMUST00000182472 968 ntBASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Gm270-201ENSMUST00000223010 976 ntBASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RpgrQ9R0X5 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RpgrQ9R0X5 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.67□□□□□ -0.54
RpgrQ9R0X5 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
RpgrQ9R0X5 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RpgrQ9R0X5 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RpgrQ9R0X5 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
RpgrQ9R0X5 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
RpgrQ9R0X5 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
RpgrQ9R0X5 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RpgrQ9R0X5 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RpgrQ9R0X5 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.67□□□□□ -0.54
RpgrQ9R0X5 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RpgrQ9R0X5 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
RpgrQ9R0X5 Gm12266-201ENSMUST00000120311 962 ntBASIC11.67□□□□□ -0.54
RpgrQ9R0X5 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RpgrQ9R0X5 Gm2383-201ENSMUST00000181461 807 ntBASIC11.67□□□□□ -0.54
RpgrQ9R0X5 Gm45224-201ENSMUST00000208203 414 ntBASIC11.67□□□□□ -0.54
RpgrQ9R0X5 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.67□□□□□ -0.54
RpgrQ9R0X5 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
RpgrQ9R0X5 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
RpgrQ9R0X5 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
RpgrQ9R0X5 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RpgrQ9R0X5 Gm26448-201ENSMUST00000082446 203 ntBASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms