Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.23□□□□□ -0.77
Nubp2Q9R061 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nubp2Q9R061 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Gm8956-201ENSMUST00000203939 825 ntBASIC10.23□□□□□ -0.77
Nubp2Q9R061 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC10.23□□□□□ -0.77
Nubp2Q9R061 Gm18165-201ENSMUST00000217426 928 ntBASIC10.23□□□□□ -0.77
Nubp2Q9R061 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nubp2Q9R061 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.23□□□□□ -0.77
Nubp2Q9R061 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.22□□□□□ -0.77
Nubp2Q9R061 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC10.22□□□□□ -0.77
Nubp2Q9R061 Gm15515-201ENSMUST00000117827 822 ntBASIC10.22□□□□□ -0.77
Nubp2Q9R061 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Gm22902-201ENSMUST00000158488 302 ntBASIC10.22□□□□□ -0.77
Nubp2Q9R061 Gm3332-201ENSMUST00000189337 928 ntBASIC10.22□□□□□ -0.77
Nubp2Q9R061 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Spcs1-203ENSMUST00000226374 592 ntBASIC10.22□□□□□ -0.77
Nubp2Q9R061 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nubp2Q9R061 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.22□□□□□ -0.77
Nubp2Q9R061 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.22□□□□□ -0.77
Nubp2Q9R061 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Nubp2Q9R061 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Nubp2Q9R061 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.21□□□□□ -0.77
Nubp2Q9R061 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nubp2Q9R061 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nubp2Q9R061 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Nubp2Q9R061 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nubp2Q9R061 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nubp2Q9R061 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nubp2Q9R061 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.77
Nubp2Q9R061 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nubp2Q9R061 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nubp2Q9R061 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nubp2Q9R061 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nubp2Q9R061 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Nubp2Q9R061 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.77
Nubp2Q9R061 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nubp2Q9R061 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nubp2Q9R061 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
Nubp2Q9R061 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Nubp2Q9R061 Gm13035-201ENSMUST00000117496 342 ntBASIC10.21□□□□□ -0.77
Nubp2Q9R061 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nubp2Q9R061 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nubp2Q9R061 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.21□□□□□ -0.77
Nubp2Q9R061 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC10.21□□□□□ -0.77
Nubp2Q9R061 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nubp2Q9R061 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
Nubp2Q9R061 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nubp2Q9R061 Gm3786-201ENSMUST00000202659 378 ntBASIC10.21□□□□□ -0.77
Nubp2Q9R061 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC10.21□□□□□ -0.77
Nubp2Q9R061 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nubp2Q9R061 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nubp2Q9R061 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nubp2Q9R061 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nubp2Q9R061 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms