Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Nkx2-4Q9EQM3 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-4Q9EQM3 Gm42499-201ENSMUST00000196193 1412 ntBASIC11.77□□□□□ -0.53
Nkx2-4Q9EQM3 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.77□□□□□ -0.53
Nkx2-4Q9EQM3 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-4Q9EQM3 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Gm36982-201ENSMUST00000193796 1128 ntBASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Gm37851-201ENSMUST00000193871 889 ntBASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Gm37207-201ENSMUST00000194284 296 ntBASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-4Q9EQM3 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 Gm43167-201ENSMUST00000202001 1606 ntBASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 Gm15815-201ENSMUST00000120569 255 ntBASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 Gm8152-201ENSMUST00000120842 637 ntBASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 Gm11960-201ENSMUST00000122068 925 ntBASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 Gm23647-201ENSMUST00000175042 109 ntBASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 Rn5s-201ENSMUST00000177555 119 ntBASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 n-R5s108-201ENSMUST00000177575 119 ntBASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 n-R5s121-201ENSMUST00000177589 119 ntBASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 Gm25872-201ENSMUST00000177784 100 ntBASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 n-R5s146-201ENSMUST00000177889 119 ntBASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 Gm22109-201ENSMUST00000177995 119 ntBASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 Gm22291-201ENSMUST00000178027 119 ntBASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 n-R5s141-201ENSMUST00000178066 119 ntBASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 Gm23284-201ENSMUST00000178069 119 ntBASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 n-R5s100-201ENSMUST00000178106 119 ntBASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 n-R5s111-201ENSMUST00000178203 119 ntBASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 n-R5s105-201ENSMUST00000178499 119 ntBASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 n-R5s149-201ENSMUST00000178520 119 ntBASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 n-R5s103-201ENSMUST00000178755 119 ntBASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 n-R5s123-201ENSMUST00000178804 119 ntBASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 n-R5s142-201ENSMUST00000178820 119 ntBASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 n-R5s144-201ENSMUST00000178859 119 ntBASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 n-R5s139-201ENSMUST00000178975 119 ntBASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 n-R5s134-201ENSMUST00000178983 119 ntBASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 n-R5s136-201ENSMUST00000179080 119 ntBASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 Gm25018-201ENSMUST00000179081 119 ntBASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 n-R5s104-201ENSMUST00000179107 119 ntBASIC11.75□□□□□ -0.53
Nkx2-4Q9EQM3 n-R5s113-201ENSMUST00000179143 119 ntBASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms