Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Paupar-201ENSMUST00000194826 3482 ntBASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Gm11500-201ENSMUST00000118237 601 ntBASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Gm12179-201ENSMUST00000118344 1272 ntBASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Gm6322-201ENSMUST00000118789 1004 ntBASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Gm15003-201ENSMUST00000118884 446 ntBASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Gm12791-201ENSMUST00000120788 655 ntBASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Gm25545-201ENSMUST00000122673 323 ntBASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Gm16030-201ENSMUST00000159098 603 ntBASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Gm17192-201ENSMUST00000169031 511 ntBASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Gm20495-201ENSMUST00000173902 235 ntBASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Gm18201-201ENSMUST00000174735 875 ntBASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rrp8Q9DB85 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Rrp8Q9DB85 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rrp8Q9DB85 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.23□□□□□ -0.61
Rrp8Q9DB85 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Rrp8Q9DB85 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rrp8Q9DB85 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rrp8Q9DB85 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.23□□□□□ -0.61
Rrp8Q9DB85 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rrp8Q9DB85 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rrp8Q9DB85 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rrp8Q9DB85 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Rrp8Q9DB85 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rrp8Q9DB85 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rrp8Q9DB85 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rrp8Q9DB85 Gm14071-201ENSMUST00000117817 509 ntBASIC11.23□□□□□ -0.61
Rrp8Q9DB85 Gm8302-201ENSMUST00000119217 852 ntBASIC11.23□□□□□ -0.61
Rrp8Q9DB85 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC11.23□□□□□ -0.61
Rrp8Q9DB85 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC11.23□□□□□ -0.61
Rrp8Q9DB85 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.23□□□□□ -0.61
Rrp8Q9DB85 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Rrp8Q9DB85 Gm17214-201ENSMUST00000164501 541 ntBASIC11.23□□□□□ -0.61
Rrp8Q9DB85 Gm8197-202ENSMUST00000193422 934 ntBASIC11.23□□□□□ -0.61
Rrp8Q9DB85 Gm43912-201ENSMUST00000204352 538 ntBASIC11.23□□□□□ -0.61
Rrp8Q9DB85 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rrp8Q9DB85 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.23□□□□□ -0.61
Rrp8Q9DB85 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC11.23□□□□□ -0.61
Rrp8Q9DB85 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rrp8Q9DB85 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rrp8Q9DB85 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Rrp8Q9DB85 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Rrp8Q9DB85 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rrp8Q9DB85 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rrp8Q9DB85 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rrp8Q9DB85 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms