Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4cQ9D7F7 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4cQ9D7F7 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4cQ9D7F7 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4cQ9D7F7 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4cQ9D7F7 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4cQ9D7F7 Gm18806-201ENSMUST00000207607 1775 ntBASIC13.69□□□□□ -0.22
Chmp4cQ9D7F7 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4cQ9D7F7 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4cQ9D7F7 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4cQ9D7F7 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.69□□□□□ -0.22
Chmp4cQ9D7F7 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC13.69□□□□□ -0.22
Chmp4cQ9D7F7 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.69□□□□□ -0.22
Chmp4cQ9D7F7 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4cQ9D7F7 Gm4157-201ENSMUST00000211647 679 ntBASIC13.69□□□□□ -0.22
Chmp4cQ9D7F7 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Chmp4cQ9D7F7 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.69□□□□□ -0.22
Chmp4cQ9D7F7 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4cQ9D7F7 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4cQ9D7F7 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4cQ9D7F7 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC13.69□□□□□ -0.22
Chmp4cQ9D7F7 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4cQ9D7F7 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Chmp4cQ9D7F7 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4cQ9D7F7 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4cQ9D7F7 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4cQ9D7F7 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4cQ9D7F7 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 AC129336.1-201ENSMUST00000220224 2277 ntBASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 AY036118-201ENSMUST00000200021 923 ntBASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 AC125409.1-201ENSMUST00000223213 3370 ntBASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp4cQ9D7F7 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Gm6560-201ENSMUST00000198588 1591 ntBASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Gm14071-201ENSMUST00000117817 509 ntBASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Gm25668-201ENSMUST00000157700 129 ntBASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Gm26083-201ENSMUST00000157904 193 ntBASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Gm6450-201ENSMUST00000200896 574 ntBASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Gm8420-201ENSMUST00000097103 598 ntBASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms