Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.54□□□□□ -0.56
Trim42Q9D2H5 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Gm16177-201ENSMUST00000120728 718 ntBASIC11.53□□□□□ -0.56
Trim42Q9D2H5 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Gm43037-201ENSMUST00000196808 250 ntBASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Lect2-202ENSMUST00000225183 823 ntBASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim42Q9D2H5 Gm43014-201ENSMUST00000198568 2443 ntBASIC11.52□□□□□ -0.56
Trim42Q9D2H5 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trim42Q9D2H5 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim42Q9D2H5 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.52□□□□□ -0.56
Trim42Q9D2H5 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim42Q9D2H5 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim42Q9D2H5 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim42Q9D2H5 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trim42Q9D2H5 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
Trim42Q9D2H5 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim42Q9D2H5 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.52□□□□□ -0.56
Trim42Q9D2H5 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trim42Q9D2H5 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim42Q9D2H5 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Trim42Q9D2H5 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim42Q9D2H5 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim42Q9D2H5 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trim42Q9D2H5 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trim42Q9D2H5 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim42Q9D2H5 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim42Q9D2H5 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim42Q9D2H5 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trim42Q9D2H5 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC11.52□□□□□ -0.57
Trim42Q9D2H5 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim42Q9D2H5 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Trim42Q9D2H5 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trim42Q9D2H5 Gm27839-201ENSMUST00000184242 106 ntBASIC11.52□□□□□ -0.57
Trim42Q9D2H5 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim42Q9D2H5 AC140209.1-201ENSMUST00000227875 284 ntBASIC11.52□□□□□ -0.57
Trim42Q9D2H5 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim42Q9D2H5 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trim42Q9D2H5 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim42Q9D2H5 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trim42Q9D2H5 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.52□□□□□ -0.57
Trim42Q9D2H5 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Trim42Q9D2H5 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trim42Q9D2H5 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim42Q9D2H5 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim42Q9D2H5 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim42Q9D2H5 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim42Q9D2H5 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms