Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retreg3Q9CQV4 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retreg3Q9CQV4 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retreg3Q9CQV4 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retreg3Q9CQV4 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.02□□□□□ -0.48
Retreg3Q9CQV4 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retreg3Q9CQV4 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Retreg3Q9CQV4 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retreg3Q9CQV4 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Gm26286-201ENSMUST00000104166 134 ntBASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Gm43815-201ENSMUST00000197676 990 ntBASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 CT025618.1-201ENSMUST00000227409 1279 ntBASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Olfr844-201ENSMUST00000054106 930 ntBASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retreg3Q9CQV4 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 Cog3-203ENSMUST00000227473 4197 ntBASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 Gm11511-201ENSMUST00000118146 540 ntBASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 Gm12383-201ENSMUST00000120628 760 ntBASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 Gm25102-201ENSMUST00000122479 112 ntBASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 Gm5523-201ENSMUST00000180415 997 ntBASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 Gm27530-201ENSMUST00000184096 98 ntBASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 Gm29611-201ENSMUST00000186132 1011 ntTSL 5 BASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 2610016A17Rik-203ENSMUST00000188711 515 ntTSL 2 BASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retreg3Q9CQV4 Gm37700-201ENSMUST00000192617 965 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms