Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Gm44364-201ENSMUST00000198368 141 ntBASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.85□□□□□ -0.67
Ska1Q9CPV1 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Gm11511-201ENSMUST00000118146 540 ntBASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Gm27516-201ENSMUST00000184237 98 ntBASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Gm32999-201ENSMUST00000192693 562 ntBASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Rprl1-202ENSMUST00000198476 238 ntBASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Gm6439-201ENSMUST00000199849 862 ntBASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Gm8956-201ENSMUST00000203939 825 ntBASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Gm3961-201ENSMUST00000204425 994 ntBASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Gm6334-201ENSMUST00000207083 228 ntBASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Gm44651-201ENSMUST00000207343 372 ntBASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Cts7-204ENSMUST00000225321 1257 ntBASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.84□□□□□ -0.67
Ska1Q9CPV1 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms