Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Gm23949-201ENSMUST00000104027 127 ntBASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Gm8343-201ENSMUST00000182705 994 ntBASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Gm9797-202ENSMUST00000218003 294 ntBASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Chmp1b1Q99LU0 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Gm12380-201ENSMUST00000119012 544 ntBASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Gm14208-201ENSMUST00000119645 678 ntBASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Mir6927-201ENSMUST00000184494 71 ntBASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Gm28450-201ENSMUST00000187349 638 ntBASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms