Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clp1Q99LI9 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clp1Q99LI9 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clp1Q99LI9 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clp1Q99LI9 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clp1Q99LI9 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clp1Q99LI9 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clp1Q99LI9 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clp1Q99LI9 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clp1Q99LI9 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.13□□□□□ -0.47
Clp1Q99LI9 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.13□□□□□ -0.47
Clp1Q99LI9 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.12□□□□□ -0.47
Clp1Q99LI9 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Gm5909-201ENSMUST00000119768 1281 ntBASIC12.12□□□□□ -0.47
Clp1Q99LI9 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Gm14126-201ENSMUST00000122345 395 ntBASIC12.12□□□□□ -0.47
Clp1Q99LI9 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Clp1Q99LI9 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Gm25343-201ENSMUST00000157460 107 ntBASIC12.12□□□□□ -0.47
Clp1Q99LI9 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.12□□□□□ -0.47
Clp1Q99LI9 Gm43752-201ENSMUST00000198475 697 ntBASIC12.12□□□□□ -0.47
Clp1Q99LI9 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Gm4903-201ENSMUST00000210462 405 ntBASIC12.12□□□□□ -0.47
Clp1Q99LI9 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.12□□□□□ -0.47
Clp1Q99LI9 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.12□□□□□ -0.47
Clp1Q99LI9 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clp1Q99LI9 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.12□□□□□ -0.47
Clp1Q99LI9 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clp1Q99LI9 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clp1Q99LI9 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clp1Q99LI9 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.11□□□□□ -0.47
Clp1Q99LI9 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Clp1Q99LI9 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.11□□□□□ -0.47
Clp1Q99LI9 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Clp1Q99LI9 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clp1Q99LI9 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clp1Q99LI9 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clp1Q99LI9 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clp1Q99LI9 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clp1Q99LI9 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clp1Q99LI9 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clp1Q99LI9 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clp1Q99LI9 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Clp1Q99LI9 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clp1Q99LI9 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.11□□□□□ -0.47
Clp1Q99LI9 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clp1Q99LI9 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clp1Q99LI9 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC12.11□□□□□ -0.47
Clp1Q99LI9 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clp1Q99LI9 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Clp1Q99LI9 Gm5308-201ENSMUST00000196752 1354 ntBASIC12.11□□□□□ -0.47
Clp1Q99LI9 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.11□□□□□ -0.47
Clp1Q99LI9 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC12.11□□□□□ -0.47
Clp1Q99LI9 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clp1Q99LI9 Gm9133-201ENSMUST00000118289 540 ntBASIC12.11□□□□□ -0.47
Clp1Q99LI9 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clp1Q99LI9 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clp1Q99LI9 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clp1Q99LI9 Gm17221-201ENSMUST00000163909 481 ntBASIC12.11□□□□□ -0.47
Clp1Q99LI9 Gm17073-201ENSMUST00000168069 556 ntBASIC12.11□□□□□ -0.47
Clp1Q99LI9 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clp1Q99LI9 Gm9162-201ENSMUST00000182081 991 ntBASIC12.11□□□□□ -0.47
Clp1Q99LI9 Gm9723-201ENSMUST00000192100 457 ntBASIC12.11□□□□□ -0.47
Clp1Q99LI9 Gm43249-201ENSMUST00000200464 458 ntBASIC12.11□□□□□ -0.47
Clp1Q99LI9 Gm44008-201ENSMUST00000204345 412 ntBASIC12.11□□□□□ -0.47
Clp1Q99LI9 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.11□□□□□ -0.47
Clp1Q99LI9 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clp1Q99LI9 AC162932.1-201ENSMUST00000219209 872 ntBASIC12.11□□□□□ -0.47
Clp1Q99LI9 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC12.11□□□□□ -0.47
Clp1Q99LI9 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clp1Q99LI9 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms