Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga6Q91XY2 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.51□□□□□ -0.57
Pcdhga6Q91XY2 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Pcdhga6Q91XY2 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.51□□□□□ -0.57
Pcdhga6Q91XY2 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pcdhga6Q91XY2 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.51□□□□□ -0.57
Pcdhga6Q91XY2 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga6Q91XY2 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga6Q91XY2 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga6Q91XY2 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga6Q91XY2 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga6Q91XY2 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.51□□□□□ -0.57
Pcdhga6Q91XY2 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga6Q91XY2 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga6Q91XY2 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pcdhga6Q91XY2 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga6Q91XY2 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.51□□□□□ -0.57
Pcdhga6Q91XY2 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga6Q91XY2 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.51□□□□□ -0.57
Pcdhga6Q91XY2 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga6Q91XY2 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Gm6108-201ENSMUST00000208365 367 ntBASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.5□□□□□ -0.57
Pcdhga6Q91XY2 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdhga6Q91XY2 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Pcdhga6Q91XY2 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdhga6Q91XY2 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Pcdhga6Q91XY2 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdhga6Q91XY2 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdhga6Q91XY2 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdhga6Q91XY2 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.49□□□□□ -0.57
Pcdhga6Q91XY2 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdhga6Q91XY2 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdhga6Q91XY2 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdhga6Q91XY2 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdhga6Q91XY2 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.49□□□□□ -0.57
Pcdhga6Q91XY2 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.49□□□□□ -0.57
Pcdhga6Q91XY2 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.49□□□□□ -0.57
Pcdhga6Q91XY2 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Pcdhga6Q91XY2 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.49□□□□□ -0.57
Pcdhga6Q91XY2 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdhga6Q91XY2 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Pcdhga6Q91XY2 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Pcdhga6Q91XY2 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.49□□□□□ -0.57
Pcdhga6Q91XY2 Gm3726-201ENSMUST00000203110 785 ntBASIC11.49□□□□□ -0.57
Pcdhga6Q91XY2 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdhga6Q91XY2 CT573086.4-201ENSMUST00000226729 342 ntBASIC11.49□□□□□ -0.57
Pcdhga6Q91XY2 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms