Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.84□□□□□ -0.51
Trim60Q8VI40 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim60Q8VI40 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim60Q8VI40 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Gm45224-201ENSMUST00000208203 414 ntBASIC11.84□□□□□ -0.51
Trim60Q8VI40 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Gm4978-201ENSMUST00000071565 801 ntBASIC11.84□□□□□ -0.51
Trim60Q8VI40 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trim60Q8VI40 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.83□□□□□ -0.51
Trim60Q8VI40 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trim60Q8VI40 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Trim60Q8VI40 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Gm11663-201ENSMUST00000117888 290 ntBASIC11.83□□□□□ -0.52
Trim60Q8VI40 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.83□□□□□ -0.52
Trim60Q8VI40 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Gm8815-201ENSMUST00000173809 620 ntBASIC11.83□□□□□ -0.52
Trim60Q8VI40 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Trim60Q8VI40 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Gm28686-201ENSMUST00000187404 609 ntBASIC11.83□□□□□ -0.52
Trim60Q8VI40 Gm28071-201ENSMUST00000190355 478 ntBASIC11.83□□□□□ -0.52
Trim60Q8VI40 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.83□□□□□ -0.52
Trim60Q8VI40 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.83□□□□□ -0.52
Trim60Q8VI40 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.83□□□□□ -0.52
Trim60Q8VI40 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim60Q8VI40 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trim60Q8VI40 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms