Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx39aQ8VDW0 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx39aQ8VDW0 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.71□□□□□ -0.37
Ddx39aQ8VDW0 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.71□□□□□ -0.37
Ddx39aQ8VDW0 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.71□□□□□ -0.37
Ddx39aQ8VDW0 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx39aQ8VDW0 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx39aQ8VDW0 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx39aQ8VDW0 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.71□□□□□ -0.37
Ddx39aQ8VDW0 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx39aQ8VDW0 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx39aQ8VDW0 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.71□□□□□ -0.37
Ddx39aQ8VDW0 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.71□□□□□ -0.37
Ddx39aQ8VDW0 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx39aQ8VDW0 Gm26134-201ENSMUST00000178484 110 ntBASIC12.71□□□□□ -0.37
Ddx39aQ8VDW0 Gm30671-201ENSMUST00000214898 318 ntBASIC12.71□□□□□ -0.37
Ddx39aQ8VDW0 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ddx39aQ8VDW0 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.71□□□□□ -0.37
Ddx39aQ8VDW0 Gm25517-201ENSMUST00000083865 134 ntBASIC12.71□□□□□ -0.37
Ddx39aQ8VDW0 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx39aQ8VDW0 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Ddx39aQ8VDW0 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx39aQ8VDW0 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.71□□□□□ -0.38
Ddx39aQ8VDW0 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.71□□□□□ -0.38
Ddx39aQ8VDW0 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ddx39aQ8VDW0 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ddx39aQ8VDW0 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ddx39aQ8VDW0 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ddx39aQ8VDW0 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Ddx39aQ8VDW0 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Ddx39aQ8VDW0 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.71□□□□□ -0.38
Ddx39aQ8VDW0 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Ddx39aQ8VDW0 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ddx39aQ8VDW0 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ddx39aQ8VDW0 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.71□□□□□ -0.38
Ddx39aQ8VDW0 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Selenot-ps-201ENSMUST00000119098 593 ntBASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Gm44008-201ENSMUST00000204345 412 ntBASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 AC129308.3-201ENSMUST00000225652 524 ntBASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx39aQ8VDW0 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms