Protein–RNA interactions for Protein: Q8CH72

Trim32, E3 ubiquitin-protein ligase TRIM32, mousemouse

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim32Q8CH72 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Trim32Q8CH72 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim32Q8CH72 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim32Q8CH72 Ctcflos-203ENSMUST00000144256 1237 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim32Q8CH72 Gm22379-201ENSMUST00000157480 131 ntBASIC13.08□□□□□ -0.32
Trim32Q8CH72 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trim32Q8CH72 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC13.08□□□□□ -0.32
Trim32Q8CH72 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim32Q8CH72 Gm44647-201ENSMUST00000207402 428 ntBASIC13.08□□□□□ -0.32
Trim32Q8CH72 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC13.08□□□□□ -0.32
Trim32Q8CH72 AC116589.4-201ENSMUST00000222390 216 ntBASIC13.08□□□□□ -0.32
Trim32Q8CH72 AC154595.1-201ENSMUST00000225533 1059 ntBASIC13.08□□□□□ -0.32
Trim32Q8CH72 AC154572.1-201ENSMUST00000226098 1204 ntBASIC13.08□□□□□ -0.32
Trim32Q8CH72 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim32Q8CH72 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim32Q8CH72 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim32Q8CH72 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim32Q8CH72 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim32Q8CH72 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim32Q8CH72 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim32Q8CH72 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim32Q8CH72 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Trim32Q8CH72 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.08□□□□□ -0.32
Trim32Q8CH72 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim32Q8CH72 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim32Q8CH72 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim32Q8CH72 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC13.08□□□□□ -0.32
Trim32Q8CH72 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Trim32Q8CH72 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Mir181d-201ENSMUST00000102383 72 ntBASIC13.07□□□□□ -0.32
Trim32Q8CH72 Gm24791-201ENSMUST00000104284 131 ntBASIC13.07□□□□□ -0.32
Trim32Q8CH72 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Gm11560-201ENSMUST00000117567 948 ntBASIC13.07□□□□□ -0.32
Trim32Q8CH72 Gm11578-201ENSMUST00000118530 459 ntBASIC13.07□□□□□ -0.32
Trim32Q8CH72 Gm13019-201ENSMUST00000120000 276 ntBASIC13.07□□□□□ -0.32
Trim32Q8CH72 Gm12791-201ENSMUST00000120788 655 ntBASIC13.07□□□□□ -0.32
Trim32Q8CH72 Gm12453-201ENSMUST00000121981 331 ntBASIC13.07□□□□□ -0.32
Trim32Q8CH72 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC13.07□□□□□ -0.32
Trim32Q8CH72 1700023C21Rik-201ENSMUST00000143247 389 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Gm25554-201ENSMUST00000158075 113 ntBASIC13.07□□□□□ -0.32
Trim32Q8CH72 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC13.07□□□□□ -0.32
Trim32Q8CH72 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Gm5982-201ENSMUST00000196234 512 ntBASIC13.07□□□□□ -0.32
Trim32Q8CH72 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Gm8436-201ENSMUST00000210152 1080 ntBASIC13.07□□□□□ -0.32
Trim32Q8CH72 Gm5749-201ENSMUST00000210673 1090 ntBASIC13.07□□□□□ -0.32
Trim32Q8CH72 Gm19046-201ENSMUST00000221263 1298 ntBASIC13.07□□□□□ -0.32
Trim32Q8CH72 AC164618.2-201ENSMUST00000224770 573 ntBASIC13.07□□□□□ -0.32
Trim32Q8CH72 AC118639.2-201ENSMUST00000226289 223 ntBASIC13.07□□□□□ -0.32
Trim32Q8CH72 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Gm5641-201ENSMUST00000091130 1488 ntBASIC13.07□□□□□ -0.32
Trim32Q8CH72 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim32Q8CH72 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trim32Q8CH72 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim32Q8CH72 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim32Q8CH72 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim32Q8CH72 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim32Q8CH72 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trim32Q8CH72 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim32Q8CH72 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim32Q8CH72 Gm5434-202ENSMUST00000222384 1451 ntBASIC13.06□□□□□ -0.32
Trim32Q8CH72 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim32Q8CH72 Gm5434-201ENSMUST00000071825 1451 ntBASIC13.06□□□□□ -0.32
Trim32Q8CH72 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim32Q8CH72 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim32Q8CH72 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim32Q8CH72 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim32Q8CH72 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim32Q8CH72 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim32Q8CH72 Gm7741-201ENSMUST00000181445 989 ntBASIC13.06□□□□□ -0.32
Trim32Q8CH72 Gm5870-201ENSMUST00000196461 282 ntBASIC13.06□□□□□ -0.32
Trim32Q8CH72 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim32Q8CH72 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms