Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc28aQ8CEI3 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Gm13296-201ENSMUST00000117854 997 ntBASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Gm27501-201ENSMUST00000183599 107 ntBASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Gm43184-201ENSMUST00000197247 542 ntBASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Gm45416-201ENSMUST00000209713 2201 ntBASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28aQ8CEI3 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 AC207128.2-201ENSMUST00000223708 1924 ntBASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Gm17420-201ENSMUST00000164753 153 ntBASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms