Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 Gm12015-201ENSMUST00000117065 843 ntBASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 Gm19187-201ENSMUST00000206781 892 ntBASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Lrif1Q8CDD9 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Lrif1Q8CDD9 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC11.33□□□□□ -0.59
Lrif1Q8CDD9 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Lrif1Q8CDD9 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Lrif1Q8CDD9 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Gm13296-201ENSMUST00000117854 997 ntBASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Gm12997-201ENSMUST00000120207 640 ntBASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lrif1Q8CDD9 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms