Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Rnf38Q8BI21 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Rnf38Q8BI21 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Gm13665-201ENSMUST00000120830 528 ntBASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf38Q8BI21 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Gm38117-201ENSMUST00000194653 939 ntBASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf38Q8BI21 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms