Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Gm11502-201ENSMUST00000120917 1211 ntBASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Gm9135-201ENSMUST00000182963 990 ntBASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Gm8531-201ENSMUST00000188319 893 ntBASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Gm29410-201ENSMUST00000188383 694 ntBASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Trav11n-201ENSMUST00000200113 343 ntBASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Gm5340-201ENSMUST00000203733 880 ntBASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Gm44647-201ENSMUST00000207402 428 ntBASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 AC164087.2-201ENSMUST00000216206 1072 ntBASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 AC154361.2-201ENSMUST00000224747 943 ntBASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 AC125539.1-201ENSMUST00000227423 622 ntBASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Gm43334-201ENSMUST00000197740 1318 ntBASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Gm24934-201ENSMUST00000103764 111 ntBASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Gm26134-201ENSMUST00000178484 110 ntBASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Gm27530-201ENSMUST00000184096 98 ntBASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Gm28195-201ENSMUST00000186992 372 ntBASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Arhgef33-210ENSMUST00000225548 456 ntBASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf38bQ80SY5 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 247.2 ms