Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Smarcd3Q6P9Z1 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Btrc-209ENSMUST00000224478 2194 ntBASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Mir8093-201ENSMUST00000185043 137 ntBASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Gm7895-201ENSMUST00000187459 1173 ntBASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Gm38117-201ENSMUST00000194653 939 ntBASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Gm5982-201ENSMUST00000196234 512 ntBASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Gm7783-201ENSMUST00000204795 781 ntBASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Gm17827-201ENSMUST00000211825 742 ntBASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Gm37660-201ENSMUST00000192754 1732 ntBASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd3Q6P9Z1 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Gm15276-201ENSMUST00000145953 498 ntBASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Gm8343-201ENSMUST00000182705 994 ntBASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Mir6420-201ENSMUST00000185032 102 ntBASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Gm38341-201ENSMUST00000195357 515 ntBASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Gm43758-201ENSMUST00000199500 367 ntBASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd3Q6P9Z1 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms