Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col11a2Q64739 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col11a2Q64739 Defa-ps17-201ENSMUST00000121849 171 ntBASIC13.59□□□□□ -0.23
Col11a2Q64739 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col11a2Q64739 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col11a2Q64739 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Col11a2Q64739 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col11a2Q64739 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col11a2Q64739 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col11a2Q64739 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col11a2Q64739 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC13.59□□□□□ -0.23
Col11a2Q64739 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col11a2Q64739 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Col11a2Q64739 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.59□□□□□ -0.23
Col11a2Q64739 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col11a2Q64739 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col11a2Q64739 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Col11a2Q64739 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col11a2Q64739 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC13.59□□□□□ -0.23
Col11a2Q64739 Gm7805-201ENSMUST00000154348 448 ntBASIC13.59□□□□□ -0.23
Col11a2Q64739 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC13.59□□□□□ -0.23
Col11a2Q64739 Gm6686-201ENSMUST00000178455 258 ntBASIC13.59□□□□□ -0.23
Col11a2Q64739 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col11a2Q64739 Mir6934-201ENSMUST00000183965 62 ntBASIC13.59□□□□□ -0.23
Col11a2Q64739 Gm18552-201ENSMUST00000187425 538 ntBASIC13.59□□□□□ -0.23
Col11a2Q64739 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col11a2Q64739 Gm8162-201ENSMUST00000213951 665 ntBASIC13.59□□□□□ -0.23
Col11a2Q64739 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col11a2Q64739 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col11a2Q64739 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col11a2Q64739 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col11a2Q64739 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col11a2Q64739 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col11a2Q64739 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col11a2Q64739 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.58□□□□□ -0.24
Col11a2Q64739 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col11a2Q64739 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col11a2Q64739 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col11a2Q64739 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC13.58□□□□□ -0.24
Col11a2Q64739 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col11a2Q64739 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col11a2Q64739 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col11a2Q64739 Klf10-203ENSMUST00000227920 2144 ntBASIC13.58□□□□□ -0.24
Col11a2Q64739 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.58□□□□□ -0.24
Col11a2Q64739 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col11a2Q64739 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col11a2Q64739 Gm13857-201ENSMUST00000139645 173 ntBASIC13.58□□□□□ -0.24
Col11a2Q64739 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Col11a2Q64739 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col11a2Q64739 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col11a2Q64739 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col11a2Q64739 Gm44304-201ENSMUST00000200509 145 ntBASIC13.58□□□□□ -0.24
Col11a2Q64739 AC133496.1-201ENSMUST00000223891 743 ntBASIC13.58□□□□□ -0.24
Col11a2Q64739 AC134913.2-201ENSMUST00000225017 771 ntBASIC13.58□□□□□ -0.24
Col11a2Q64739 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col11a2Q64739 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col11a2Q64739 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col11a2Q64739 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a2Q64739 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a2Q64739 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.57□□□□□ -0.24
Col11a2Q64739 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a2Q64739 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a2Q64739 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a2Q64739 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a2Q64739 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a2Q64739 Gm12435-201ENSMUST00000118949 1016 ntBASIC13.57□□□□□ -0.24
Col11a2Q64739 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a2Q64739 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a2Q64739 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC13.57□□□□□ -0.24
Col11a2Q64739 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a2Q64739 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a2Q64739 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a2Q64739 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC13.57□□□□□ -0.24
Col11a2Q64739 BB187690-201ENSMUST00000198619 1176 ntBASIC13.57□□□□□ -0.24
Col11a2Q64739 Gm44917-201ENSMUST00000208798 520 ntBASIC13.57□□□□□ -0.24
Col11a2Q64739 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a2Q64739 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a2Q64739 AC132384.2-201ENSMUST00000218018 526 ntBASIC13.57□□□□□ -0.24
Col11a2Q64739 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a2Q64739 Gm8796-201ENSMUST00000219122 936 ntBASIC13.57□□□□□ -0.24
Col11a2Q64739 Gm8557-201ENSMUST00000220777 475 ntBASIC13.57□□□□□ -0.24
Col11a2Q64739 AC165260.2-201ENSMUST00000225371 395 ntBASIC13.57□□□□□ -0.24
Col11a2Q64739 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a2Q64739 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a2Q64739 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a2Q64739 Gm5424-201ENSMUST00000053865 1240 ntBASIC13.57□□□□□ -0.24
Col11a2Q64739 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Col11a2Q64739 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Col11a2Q64739 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a2Q64739 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Col11a2Q64739 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a2Q64739 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a2Q64739 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a2Q64739 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a2Q64739 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a2Q64739 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Col11a2Q64739 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a2Q64739 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.57□□□□□ -0.24
Col11a2Q64739 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a2Q64739 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms